| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5971 |
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| Symbol | |
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| ID | 8362153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7577641 |
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| End bp | 7578534 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644968111 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003125590 |
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| Protein GI | 256424937 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.965071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAAG AACAGCATAG CAATATTGAA GAATATCATC TCAACCGGCA CCAGCCAGGT
GAAGACCAGT TTGTGATTCA TGATCTAAAA ACCTATCTGA ATAGAAATAG CAATAATACA
ACAAGGCCAC ATATTCATAG CTATTACCAG ATTATATGGT TTAAAACTGG AATGGGTAAA
CATTATGTTG ACTTTATAAG TCATGAAGTG AATGACCAGA TGATTTTTTT TATAGCAAAA
AATCAGGTTC ATTATTTTGA TAAGAATATT GAATACGAAG GTTTTTTGTT ACATTTCAAT
GAAACTTTTC TGGGACAGGA TGATGAAACG GATTTCTTCT TAAAATGTAA TTTATTCAAC
AATCCATACC AGCAGCCGTA TTGCAGGGTT GATACTTCAA CCATTTCAAA ATTGGATATC
AATATTCAAC AACTGAAAGG AGAATTAGCT GAGAGTAATC CTTTTGGGAG AAATGAAATA
ATCCGGGCCT ACCTGAAGTC AGTGCTGATA TTGGTACAAC GAAGTAAAAA TGCATATAAT
ATTCAGCAAC CAGATTCTTT TACTGCAGAT GATAAACGTA TACAACTGGT TAAGTTTTTC
AATTTAGTTG AAGAACATTA TAAAGAAGGA CTAACAATTA ATGAATATGC ACGTAAATTA
AATATTTCCA CACGTACACT TTCGGACCTC ACCAATCAAC AGGTAAATAA AACACCTTCT
CAAATGATTC AGGAACGAAT TATTCTTGAA GCCCAGCGTT TGCTTGTACA TTCCAACCTT
AATATTAATC AGATCGGCTT TCGAATGGGC TTTGATGATC CATCTTATTT TGTAAAGTAC
TTTAAGAAGC ATACAAAGAT GTCTCCTTCG GATTTCCGGA AGACCATTGC TTAA
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| Protein sequence | MSKEQHSNIE EYHLNRHQPG EDQFVIHDLK TYLNRNSNNT TRPHIHSYYQ IIWFKTGMGK
HYVDFISHEV NDQMIFFIAK NQVHYFDKNI EYEGFLLHFN ETFLGQDDET DFFLKCNLFN
NPYQQPYCRV DTSTISKLDI NIQQLKGELA ESNPFGRNEI IRAYLKSVLI LVQRSKNAYN
IQQPDSFTAD DKRIQLVKFF NLVEEHYKEG LTINEYARKL NISTRTLSDL TNQQVNKTPS
QMIQERIILE AQRLLVHSNL NINQIGFRMG FDDPSYFVKY FKKHTKMSPS DFRKTIA
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