Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5964 |
Symbol | |
ID | 8362146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7572574 |
End bp | 7572978 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644968104 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003125583 |
Protein GI | 256424930 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.194078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCGG GATTCTACTT ATATAAGCGT ATTGTACAGG CAAAGTTGTT TATTGATAAT AACAGTGCCG AACCTATTGA CCTTGATCAA ATTTCTGATG AAGCGTATTT TTCAAAATTT CATTTTATCC GGTTGTTTAA GAAGATGTAT GGCCGCACAC CCCATCAGTA CCTGATTGCT GTAAGGCTGG AAAAGGCAAG GCAGTTATTG ACAAGAGGTA TGCCAGTATC TGATGTGTGT GTGTCTATTG GTTTTGAGAG TCTTAGTACA TTTAGCGGTA AGTTTAAACA AGCATTTGGG ATGACGCCTA CTGCATTTAT TGCTTACCGG GCCGAACAGC AGCAGCAGCC GTTGAAATAT ATCCCCGGTT GTTTTATTAG CAATTTTGAA GAAACCACCA TGTAA
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Protein sequence | MAPGFYLYKR IVQAKLFIDN NSAEPIDLDQ ISDEAYFSKF HFIRLFKKMY GRTPHQYLIA VRLEKARQLL TRGMPVSDVC VSIGFESLST FSGKFKQAFG MTPTAFIAYR AEQQQQPLKY IPGCFISNFE ETTM
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