| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5960 |
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| Symbol | |
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| ID | 8362141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7567433 |
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| End bp | 7568245 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968099 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN- su ccinyltransferase |
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| Protein accession | YP_003125579 |
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| Protein GI | 256424926 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.758205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.199656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTAC AAGAATTAAT AAAAGCGGCC TGGAATGATC GTGCGTTGCT ACAGGAGTCA
CAATACAGTG ATGCAGTAAA ATGCGTGATC GAGGCTGTAG ACAAAGGCAA AACAAGAGTC
GCTGAACCTG GAGAGAACGG TTGGAAAGTG AATGAGTGGG TTAAGCAGGC CATTCTGATG
TATTTCGGCA TTCAGTCAAT GGAGACCATA GAAGTAGGAC CATTCGAGTT CTATGACAAA
ATGAAGCTGA AATCCCGTTA CAAGGATCTG GGTGTACGTG TTGTACCTCA TGCAGTTGCC
CGTTACGGTG CTTTTATTGC TAAGGGAGCG ATCCTGATGC CATCTTATGT AAACATCGGC
GCTTACGTTG ACGAAGGTAC CATGGTGGAT ACCTGGGCGA CAGTAGGCTC ATGCGCACAA
ATCGGTAAGC ACGTTCACCT GAGCGGTGGC GTTGGTATCG GTGGCGTACT GGAACCTCTG
CAGGCTAGTC CGGTAATCAT TGAAGACGGT TGCTTTATCG GCTCCCGTTG TATCGTTGTA
GAAGGCGTAG TCGTAGAGAA AGAAGCGGTA CTGGGTGCTA ACGTAGTATT AACCCAGAGC
ACCAAAATCA TCGACGTAAG CGGTCCGGAA CCAATTGAGT ACAAAGGCCG TGTACCAGCA
CGCAGCGTGG TAATTCCAGG TACTTATACC AAGAAATTCC CTGCCGGCGA ATACCAGGTT
TCCTGTGCAC TGATCATCGG TCAGCGTAAA GCATCTACAG ACCTGAAAAC CAGTCTGAAC
GACACCCTGA GAGAATTTAA CGTAGCTGTA TAA
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| Protein sequence | MELQELIKAA WNDRALLQES QYSDAVKCVI EAVDKGKTRV AEPGENGWKV NEWVKQAILM
YFGIQSMETI EVGPFEFYDK MKLKSRYKDL GVRVVPHAVA RYGAFIAKGA ILMPSYVNIG
AYVDEGTMVD TWATVGSCAQ IGKHVHLSGG VGIGGVLEPL QASPVIIEDG CFIGSRCIVV
EGVVVEKEAV LGANVVLTQS TKIIDVSGPE PIEYKGRVPA RSVVIPGTYT KKFPAGEYQV
SCALIIGQRK ASTDLKTSLN DTLREFNVAV
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