| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5958 |
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| Symbol | |
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| ID | 8362139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7565639 |
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| End bp | 7566208 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968097 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_003125577 |
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| Protein GI | 256424924 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0703891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0596228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGAAT TTGAAAATGA TATAAGCGCC TCTCTGCAGG TGTTACGTAG CGGAGGATTG
ATCCTGTACC CTACAGATAC AATCTGGGGT ATAGGTTGTG ATGCGACCGA CGAAGCGGCC
GTAAAAAAGG TATTTACGCT CAAAGACCGG CCCGAGGCAA AAAGCCTTGT GATTCTGCTG
GCTGATGTAA GGGACCTGCT GAAATACGTG GCGCATCCCA GTCCGGAGAT CGCAGATATC
CTTGCAGGAT TTGACAGACC TACAACCGTC ATTTATGAAG GCGCCCTTGA CCTCGCTCCG
AATGTGATCA ACAGCGACGG TACCGTAGCG ATCCGTATCG TAAAAGATAC TTTCTGCCGC
CATCTGATCA AACGTCTACG GAAACCGTTG GTTTCTACTT CTGCGAATCT CAGCGGACAG
CCATCACCGG CAACTTTTGC AGAAGTATCG CCTGAAATCA TCAACGGTGT GGACTATGTG
GTGTCTTACA GACAGGATGA TACTACGCCC GCACAGGCTT CCAGGATTAT CAAGCTGCTG
AAAGATGGCA GTGTTCAGGT GATCAGATAA
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| Protein sequence | MIEFENDISA SLQVLRSGGL ILYPTDTIWG IGCDATDEAA VKKVFTLKDR PEAKSLVILL
ADVRDLLKYV AHPSPEIADI LAGFDRPTTV IYEGALDLAP NVINSDGTVA IRIVKDTFCR
HLIKRLRKPL VSTSANLSGQ PSPATFAEVS PEIINGVDYV VSYRQDDTTP AQASRIIKLL
KDGSVQVIR
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