Gene Cpin_5956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5956 
Symbol 
ID8362137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7563479 
End bp7564054 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content44% 
IMG OID644968095 
Producthypothetical protein 
Protein accessionYP_003125575 
Protein GI256424922 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0211287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0139937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTT TGAAATTCAG AGTTTACTGG GAAGAAGATG AAAGTGTGTA CAGGGATATT 
TCCATTAAAC CGGACCAGAC ATTTTTACAA TTTCATCAAA CTATTTTACA GTCATTCGAA
TTTGACAATA AACATAAAGC GACTTTTTTC CGTAGCAATG ATAACTGGCA ACGGGGCAGA
GAGATCATTC TTGAACAGGA TGGCGCTGCA CGTAAGGTTG AACCGCTCCT GATGGAAGAA
ACGCCTATCG CCGCAGCTGT AAAAACGCCC AACCAGAAGT TCATATACCT GTATGACTAT
GCGAAAAACT GGACGTTCCT TGTAGAGCTG ATCGGTGTGT CAAAAGACGA AAACTCAAAG
GTTGCCTATC CTTTCTGCAC CAGGAAAGAA GGTCTCGCAC CAAGCCAGTA TGGTACCAAA
GGTCTCGTAG GCGATAAACT CGTTGAAATG GAGGAGAAAT ATGACCTCAA TAAAGAGGGT
ATGAGCGAAG ACGGCTTTGG TGAAGAAGGT GAGGAAGATA ATACCGACGC AGAAGATGAC
GGCGGTGAAG ATCAGGGCAC CGACGATATG TATTAA
 
Protein sequence
MPVLKFRVYW EEDESVYRDI SIKPDQTFLQ FHQTILQSFE FDNKHKATFF RSNDNWQRGR 
EIILEQDGAA RKVEPLLMEE TPIAAAVKTP NQKFIYLYDY AKNWTFLVEL IGVSKDENSK
VAYPFCTRKE GLAPSQYGTK GLVGDKLVEM EEKYDLNKEG MSEDGFGEEG EEDNTDAEDD
GGEDQGTDDM Y