Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5956 |
Symbol | |
ID | 8362137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7563479 |
End bp | 7564054 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644968095 |
Product | hypothetical protein |
Protein accession | YP_003125575 |
Protein GI | 256424922 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0211287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0139937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGTTT TGAAATTCAG AGTTTACTGG GAAGAAGATG AAAGTGTGTA CAGGGATATT TCCATTAAAC CGGACCAGAC ATTTTTACAA TTTCATCAAA CTATTTTACA GTCATTCGAA TTTGACAATA AACATAAAGC GACTTTTTTC CGTAGCAATG ATAACTGGCA ACGGGGCAGA GAGATCATTC TTGAACAGGA TGGCGCTGCA CGTAAGGTTG AACCGCTCCT GATGGAAGAA ACGCCTATCG CCGCAGCTGT AAAAACGCCC AACCAGAAGT TCATATACCT GTATGACTAT GCGAAAAACT GGACGTTCCT TGTAGAGCTG ATCGGTGTGT CAAAAGACGA AAACTCAAAG GTTGCCTATC CTTTCTGCAC CAGGAAAGAA GGTCTCGCAC CAAGCCAGTA TGGTACCAAA GGTCTCGTAG GCGATAAACT CGTTGAAATG GAGGAGAAAT ATGACCTCAA TAAAGAGGGT ATGAGCGAAG ACGGCTTTGG TGAAGAAGGT GAGGAAGATA ATACCGACGC AGAAGATGAC GGCGGTGAAG ATCAGGGCAC CGACGATATG TATTAA
|
Protein sequence | MPVLKFRVYW EEDESVYRDI SIKPDQTFLQ FHQTILQSFE FDNKHKATFF RSNDNWQRGR EIILEQDGAA RKVEPLLMEE TPIAAAVKTP NQKFIYLYDY AKNWTFLVEL IGVSKDENSK VAYPFCTRKE GLAPSQYGTK GLVGDKLVEM EEKYDLNKEG MSEDGFGEEG EEDNTDAEDD GGEDQGTDDM Y
|
| |