Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5955 |
Symbol | miaA |
ID | 8362136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7562477 |
End bp | 7563379 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644968094 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_003125574 |
Protein GI | 256424921 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00180146 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0166501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGTCTA TTATTATAGT CGCAGGCCCC ACCGCATCGG GCAAAACCGC CAAAGCAATA GAAGTGGCCC AACACTTTAA TACGGCCGTT ATCTCTGCGG ATTCCCGGCA ATGTTACCAG GAAATAAGTA TTGGTACTGC TAAACCCAGT GTCCAGGAAT TACAGACCGT TCCCCACTAT TTTATCAATT CTCACTCGAT ACAGGAAGAA GTCAATGCTG GTCTGTATGA ACAGCTGGCC CTGAATTATG CAGCAGAAAT CTGGAAAGAT AATGATGTCG CCGTTATGTG CGGTGGTACA GGGCTTTATA TTAAAGCTTT TTGTGAAGGC ATGGATAACA TGCCCGTTAT CCCTCCCGGT ATCCGCACGT CTATTCAGAC CCGTTATGAG CAGGAAGGAA TGAGCTGGCT GCAACAAGAG GTACAGGAGA AAGATCCCGG CTTCTATGCC AATGCAGAAA CACAGAATCC ACATCGTTTA ATGCGGGCAT TAGAAGTGCT GTATGCTACG GGGCAGTCTA TTAACAGCTT CCGGACAGGC AATGTGGTAA AAAGGGATTT TAATATCATT AAAACCGCCA TTACCTTACC TAAGGAGCGG CTGCACGATA ATATAGCCCG CAGAGTACAT ATGATGGTAG CGGAAGGCTT ACTGGAAGAA GTACGCGCTG TATTGCCTTA TCGTACACAT AATGCTTTGC AGACAGTGGG GTATAAAGAA GTGTTTGATT ACCTGGATGG GAAAATATCC TGGGATGAAG CAGTTGAACA GATCATTATT CATACCCGTC AGTATGCTAA GAGACAGTTG ACCTGGTTTA GGAAGGATAC TGGTTTTAAG TGGTATGAAG GAGGGGAGGG GCTGCTGCCT GACGTGGTCA GGCAATTAGG AATTAACAAT TAG
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Protein sequence | MKSIIIVAGP TASGKTAKAI EVAQHFNTAV ISADSRQCYQ EISIGTAKPS VQELQTVPHY FINSHSIQEE VNAGLYEQLA LNYAAEIWKD NDVAVMCGGT GLYIKAFCEG MDNMPVIPPG IRTSIQTRYE QEGMSWLQQE VQEKDPGFYA NAETQNPHRL MRALEVLYAT GQSINSFRTG NVVKRDFNII KTAITLPKER LHDNIARRVH MMVAEGLLEE VRAVLPYRTH NALQTVGYKE VFDYLDGKIS WDEAVEQIII HTRQYAKRQL TWFRKDTGFK WYEGGEGLLP DVVRQLGINN
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