Gene Cpin_5947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5947 
Symbol 
ID8362128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7550757 
End bp7551104 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content44% 
IMG OID644968086 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003125566 
Protein GI256424913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.455605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0401572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCA AGATAACAGA CGAATGTATT AATTGTGGTG CTTGTGAACC TGAATGTCCT 
AATAACGCTA TTTATGAGGG TGGTGTTGAA TGGGCGATGG CTGATGGTAC CTCTATTAAA
GGCGGTTTCG TGATGATGGA CGGCTCTACT ATCGATGCTG ACCAGCGTAA TGCGCCAATT
GCTGTAGACA GTTATTACAT CGTTCCAAAC AAATGTACAG AATGCCAGGG CTTCCATGAA
GAGCCTCAGT GTGCGGCTGT TTGTCCGGTA GATTGCTGTG TTCCTGACGA AATGTACCAG
GAAACAGTAG ATGATCTGCT GGCTAAGAAA GAAAAATTAC ATATGTAA
 
Protein sequence
MAIKITDECI NCGACEPECP NNAIYEGGVE WAMADGTSIK GGFVMMDGST IDADQRNAPI 
AVDSYYIVPN KCTECQGFHE EPQCAAVCPV DCCVPDEMYQ ETVDDLLAKK EKLHM