| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5945 |
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| Symbol | |
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| ID | 8362126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7548728 |
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| End bp | 7549549 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968084 |
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| Product | PASTA domain containing protein |
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| Protein accession | YP_003125564 |
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| Protein GI | 256424911 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2815] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.637805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0723251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCAATT CAATAACTAA ACGCTCCTTC GGCTTTAATC TGCTGGTTAT CATAGGGATC
TTTGCCGTTC TGGGGTTGCT TTTCTTTTCA TTACTGGGAA TTATTACAAA ACACGGGGAT
ACCCTTACCG TACCTGACGT TTATAAGAAA AATATACAGG AAGCCACTAT GATCCTTGAA
AAAGAAGGAT TCAGCGTGGA CGTGAGAGAT TCAATCTATG TTGACAGTCT TCCGGGCCTG
GCCGTATGGG AACAGACACC TGCCAGAGGA TCTGTTGTAA AAGTTGGTCG TACCATCTAC
CTGACCGTTA ACAAAGTAAT ACCGCCAATG GTACAGATGC CTGATCTGAC CGGTCTGACC
TTCCGCAGTG CTGAAATGAC CCTGCATAGT CTCAGACTCA ACGTTGGTGA TACCATCTAC
AAACCTGACT TCGCTACCAA TACTGTATTA CAGCAGCTGC TCAACGGCAA AACCGTTAAG
CCTGGCAGAG ATATTCCTGA AGGTAGCAAT ATCACCCTCG TACTGAGCAG CGGTACTGGT
AACACTGAAA ACCCTGTTCC GGACCTGACC GGTATGACTT ACCTGGAAGC AAAAGAGACA
CTGAGCGCCA GCAACCTGGG CCTGGGTACA GTCATCATAG ATCCTTCTGT GACCGATACT
GCGAATGCCT TCGTGGTAAA ACAGATCCCG CTGCGCAAAA ACCCCCTGAA CGAAACAAAT
ATGATCCGTG CAGGTGAGAG CATCGATATC TGGTTGTCCA ACACCCGTCC TGAAAAGGAT
AGTGGTGTAG CACCGCCTGC TCCGGCAGAC GAACAGCATT AA
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| Protein sequence | MFNSITKRSF GFNLLVIIGI FAVLGLLFFS LLGIITKHGD TLTVPDVYKK NIQEATMILE
KEGFSVDVRD SIYVDSLPGL AVWEQTPARG SVVKVGRTIY LTVNKVIPPM VQMPDLTGLT
FRSAEMTLHS LRLNVGDTIY KPDFATNTVL QQLLNGKTVK PGRDIPEGSN ITLVLSSGTG
NTENPVPDLT GMTYLEAKET LSASNLGLGT VIIDPSVTDT ANAFVVKQIP LRKNPLNETN
MIRAGESIDI WLSNTRPEKD SGVAPPAPAD EQH
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