| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5920 |
|---|
| Symbol | |
|---|
| ID | 8362101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7513128 |
|---|
| End bp | 7513475 |
|---|
| Gene Length | 348 bp |
|---|
| Protein Length | 115 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644968059 |
|---|
| Product | preprotein translocase, SecG subunit |
|---|
| Protein accession | YP_003125539 |
|---|
| Protein GI | 256424886 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1314] Preprotein translocase subunit SecG |
|---|
| TIGRFAM ID | [TIGR00810] protein translocase, SecG subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0413525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTATTGA TTTTCGGCAT TTTAATCATC CTGGCCTGTG TGCTTTTGGG TTTTTTCGTA
CTGGTACAGA ACCCGAAAGG TGGTGGGTTA TCCGGTACCC TGGGTGGATT TGGTAACCAG
GTGATGGGCG TACGCCAGAC TACAGATGTA CTTGAAAAAG GTACCTGGGT ACTGTCAGCT
ATCATTGCCG TACTGTGTCT GACTTCTTCC CTGTTTATTT CCAGAGGTAC TACTTCTGAA
CAGAGAAAAG CAATCATGGA GCAGAACGCA GCCGCTCCGG CTCCGGCACA AACTCCAGCA
ACGCCACTTC AGAGCCAGCC AGCTCCAGCT GCTGACTCGA ACAAATAA
|
|---|
| Protein sequence | MLLIFGILII LACVLLGFFV LVQNPKGGGL SGTLGGFGNQ VMGVRQTTDV LEKGTWVLSA
IIAVLCLTSS LFISRGTTSE QRKAIMEQNA AAPAPAQTPA TPLQSQPAPA ADSNK
|
|---|
| |