| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5917 |
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| Symbol | |
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| ID | 8362098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7509969 |
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| End bp | 7511228 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968056 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003125536 |
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| Protein GI | 256424883 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000432262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.978022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATA ACATTCAGTC CATTAAAAAC AGGTTTGGCA TTATAGGAAA CTCACCAGCA
TTGAATTATG CGCTGCAGGT AGCAGCGCAG GTGTCCAATA CGGACCTGAC AGTGTTGATA
AACGGAGAAA GTGGCGTTGG TAAAGAGGCG TTTTCAAATG TTATCCATTC ATTGAGTGCC
CGTAAACATA ACCCTTTCAT CGCCGTTAAC TGCGGCGCCA TTCCTGAAGG GACTATTGAC
TCAGAACTTT TCGGCCATGA AAAAGGCTCC TTTACAGGAG CCGTTGACAG CCGTAAGGGA
TATTTCGAAA CCGTGAACGG TGGTACCATC TTCCTCGACG AGATCGGAGA AATGCCGCTG
GGCACACAGG CCCGCCTGCT GCGCGTACTG GAAACAGGCG AGTTTATCAG GGTGGGTTCT
TCCAAAGTAC AGAAGACAGA CGTACGTGTT GTGGCAGCAA CCAACAGAGA CCTGCTGGAA
CATACACAAC AGGGTAAGTT CAGGGAAGAC CTGTATTACC GCCTGAACAC CGTACCTATC
CGCGTACCAG CCCTCAGAGA CAGGAAAGAA GATATTATAC TCCTGTTCCG TAAATTCTGT
GTAGACTTTG CTGAACGTTA TAAAACGCCT GCCATCCAGC TGGATGAAGA AGCGCGTAAT
ATACTGATCA ACTATACATG GAGAGGTAAC GTACGTGAAC TCAAGAATAT GGCGGAGCAG
ATCTCCGTAC TGGCACAGGA TAAACTGGTC AATGCACAGG AACTCAGACG TTTCCTGCCA
GATATACCAG AGCCTTCCCG CCTGCCGATG ATCGCAGCGC CACAAGGCAA GAGCAACGGC
GACTTTGCCA GCGAAAGGGA TATCCTGTAC AAACTCTTCT TCGACATGAA GAAAGATGTA
ACAGAACTGA AGAAGATGTT CTTCGACATC CTTCAGAACC CTGCGATGGC ACATTCCGGC
AACTTCCAGG ATAGCCATGT ACTGCATAGT TTCCATCCGC AGCCGGAAGT AACATCGACC
GCAGTACCGG TGCCAACCGC TATCTCGTCT CCACAACCTA TTATTTTACA ACAGGATAAC
AACAAGATAG ATCACCACGA AGAAGTAGAG GAAACTTTAT CCATTGCCGA CAAAGAGAAA
GAACTGATCG TCAAAGCCCT GAAAAAACAC AAGGGTAAAA GGAAAGACGC AGCGCTGGAC
CTGGGCATTT CCGAAAGAAC ACTGTACAGG AAATTAAAAG AATACAACAT TAACGAATAA
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| Protein sequence | MDNNIQSIKN RFGIIGNSPA LNYALQVAAQ VSNTDLTVLI NGESGVGKEA FSNVIHSLSA
RKHNPFIAVN CGAIPEGTID SELFGHEKGS FTGAVDSRKG YFETVNGGTI FLDEIGEMPL
GTQARLLRVL ETGEFIRVGS SKVQKTDVRV VAATNRDLLE HTQQGKFRED LYYRLNTVPI
RVPALRDRKE DIILLFRKFC VDFAERYKTP AIQLDEEARN ILINYTWRGN VRELKNMAEQ
ISVLAQDKLV NAQELRRFLP DIPEPSRLPM IAAPQGKSNG DFASERDILY KLFFDMKKDV
TELKKMFFDI LQNPAMAHSG NFQDSHVLHS FHPQPEVTST AVPVPTAISS PQPIILQQDN
NKIDHHEEVE ETLSIADKEK ELIVKALKKH KGKRKDAALD LGISERTLYR KLKEYNINE
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