Gene Cpin_5906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5906 
Symbol 
ID8362087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7500744 
End bp7501424 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content48% 
IMG OID644968045 
ProductAspartyl/Asparaginyl beta-hydroxylase 
Protein accessionYP_003125525 
Protein GI256424872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.920241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.561724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTACA TCAGGTTTTC CTCTACCTAC AATCACCAGC AGCTTTGCGC TGAACTGGAA 
AACGTACTCC AACAAGACTG GCCACTCCAT TTTAATACCC GTGATTTCGA CGGAGAATGG
CGCAGCATAT CCCTGCGTTC CGCCAGCGGA AACAGCCAGG ATATACTGGC TCATCCGGAA
GCACAATACC AGGATACGCC CGTACTCGCC ATGATGCCCT ACGCCAAAGA GATCATCGAT
TCCTGGAAAT GTGAGAAAGA AGCCGTGCGA CTGTTGTCCT TATCCCCAGG CAGCGAGATC
AAACCACATA AAGATCCCGG ATGCGGTTAC CGGGATGGTG TTTTCAGAAT ACACATTCCG
ATCATGACCA ACCCGGAAGT ATACTTTATG CTGGAAGAGG AAAAACTGCG TTTGCAGTCC
GGCGAATGCT GGTACATGGA TTTCAGCTGT ACACACGCTA TCGTAAACAA AGGTTATACA
GCAAGAGTAC ACCTGATCAT GGATTGTATC CGGAATGAAT GGAGCGACCA GCTATTTGCG
GGGCATGGGT ATGATATTGC TACCAAACGA AAATCTCCCC AAATGGATCC GGCTACGCGT
ACTGCTATGA TAGCAGAACT GGAGAGAATG GATACCGATA CCACCAGAGC GCTTATTGCC
CGTTTAAAAG CAGAACAATA A
 
Protein sequence
MNYIRFSSTY NHQQLCAELE NVLQQDWPLH FNTRDFDGEW RSISLRSASG NSQDILAHPE 
AQYQDTPVLA MMPYAKEIID SWKCEKEAVR LLSLSPGSEI KPHKDPGCGY RDGVFRIHIP
IMTNPEVYFM LEEEKLRLQS GECWYMDFSC THAIVNKGYT ARVHLIMDCI RNEWSDQLFA
GHGYDIATKR KSPQMDPATR TAMIAELERM DTDTTRALIA RLKAEQ