Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5906 |
Symbol | |
ID | 8362087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7500744 |
End bp | 7501424 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644968045 |
Product | Aspartyl/Asparaginyl beta-hydroxylase |
Protein accession | YP_003125525 |
Protein GI | 256424872 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.920241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.561724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTACA TCAGGTTTTC CTCTACCTAC AATCACCAGC AGCTTTGCGC TGAACTGGAA AACGTACTCC AACAAGACTG GCCACTCCAT TTTAATACCC GTGATTTCGA CGGAGAATGG CGCAGCATAT CCCTGCGTTC CGCCAGCGGA AACAGCCAGG ATATACTGGC TCATCCGGAA GCACAATACC AGGATACGCC CGTACTCGCC ATGATGCCCT ACGCCAAAGA GATCATCGAT TCCTGGAAAT GTGAGAAAGA AGCCGTGCGA CTGTTGTCCT TATCCCCAGG CAGCGAGATC AAACCACATA AAGATCCCGG ATGCGGTTAC CGGGATGGTG TTTTCAGAAT ACACATTCCG ATCATGACCA ACCCGGAAGT ATACTTTATG CTGGAAGAGG AAAAACTGCG TTTGCAGTCC GGCGAATGCT GGTACATGGA TTTCAGCTGT ACACACGCTA TCGTAAACAA AGGTTATACA GCAAGAGTAC ACCTGATCAT GGATTGTATC CGGAATGAAT GGAGCGACCA GCTATTTGCG GGGCATGGGT ATGATATTGC TACCAAACGA AAATCTCCCC AAATGGATCC GGCTACGCGT ACTGCTATGA TAGCAGAACT GGAGAGAATG GATACCGATA CCACCAGAGC GCTTATTGCC CGTTTAAAAG CAGAACAATA A
|
Protein sequence | MNYIRFSSTY NHQQLCAELE NVLQQDWPLH FNTRDFDGEW RSISLRSASG NSQDILAHPE AQYQDTPVLA MMPYAKEIID SWKCEKEAVR LLSLSPGSEI KPHKDPGCGY RDGVFRIHIP IMTNPEVYFM LEEEKLRLQS GECWYMDFSC THAIVNKGYT ARVHLIMDCI RNEWSDQLFA GHGYDIATKR KSPQMDPATR TAMIAELERM DTDTTRALIA RLKAEQ
|
| |