Gene Cpin_5904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5904 
Symbol 
ID8362085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7498988 
End bp7499581 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content44% 
IMG OID644968043 
Producthypothetical protein 
Protein accessionYP_003125523 
Protein GI256424870 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.71245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAGCA TCCCTTTTGA ACTGCACCTC ACAATACATG GCCTGTTAAC CGCTGATATT 
GAACATTTTG TCAGTTGCTG CACTGCACAG GAAGCTAAGC CGATGATGAT TGAGCTTTCC
AGAGGAACAT ATATTCATCA GCCGATGATG AACAAGGTTG TAATCACATC TTCCCTTCAG
GAGGCATTGA TGGATGCAAC AATGCTGTCT GGTATACTAC AGACAAGCGG CTTCCCTGTA
AAAAGACTGA AGATTGAAGT CCCGGCAGAT CAGTTTGACG CCGTACCCGA TATGTCAGCA
AACTTTACAC CTTACTTCGA ATGGCATGGA AAAGTGATGT ATGACAACGT ACACGCTTTA
CTGGAATGTT GTGCCACGTA CCAGGTGCAT TTATCAAGGA ATGCCCTTAA ACAGGAGCAG
ACTACCAGGT TTGTTACCCT GCGGGAATTC GGAGATATAA ATATCTTTCA GCAACGGATC
AACAAGCTCT CTGCAGCGCT TAATGACGGC GGATGGACAG TTATTAAACA GCAATCAGAA
TATTGCATAT ACGACAACAA CATAATTTTA GACGGAGGCT GGTTAACCCA ATAA
 
Protein sequence
MNSIPFELHL TIHGLLTADI EHFVSCCTAQ EAKPMMIELS RGTYIHQPMM NKVVITSSLQ 
EALMDATMLS GILQTSGFPV KRLKIEVPAD QFDAVPDMSA NFTPYFEWHG KVMYDNVHAL
LECCATYQVH LSRNALKQEQ TTRFVTLREF GDINIFQQRI NKLSAALNDG GWTVIKQQSE
YCIYDNNIIL DGGWLTQ