| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5898 |
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| Symbol | |
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| ID | 8362079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7490758 |
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| End bp | 7494651 |
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| Gene Length | 3894 bp |
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| Protein Length | 1297 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968037 |
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| Product | chitinase-like protein |
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| Protein accession | YP_003125517 |
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| Protein GI | 256424864 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3179] Predicted chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAA AACACTTTGT TGTACAGGGA GCCGCATGTA AATGCAACTT CGGTGGCGCC
CCGGATAAAC TGAAAATATC CGCCAACGAC CGCGATTATA TCAATGATGG AGATGGCAGC
GCCAAACCCA TTGCCAGTAA TAAAGATTTA GGACAACCGC TGGAGGCAAA AACCTTCGGC
AACTGTTCCA TCACCAGGAG CTCCTGTAGC CCTTCTATCA CACAATGGCA GAGCGTTTAT
GAAAAAGTAA CACTGACTAA CGGGGGTAAG ATCCTGACAG AAGAAAGTAA AGCGATCTGT
TCCGTCTCCG GATCTCCTTG TATATCCATC ACCTTCCACG GACAAACAGC CGCCGTCACC
AGCACCCACT TCGATAATGT CGAAGTGCAG ACAATGGCGG CCCTTAATCC GATGGCGCCT
AAACCTGCCA GTGGCAAGGA AATACCTAAA GTAAAATCCA TCAGTGGTAA AATAGAAACA
CGTAGACCTT CCCTGGAAAT CCCGAGTAGT AAGGTGGTGC CAATGATGAC GGCCCGTGTC
AACGAACAGC TGAAGTTCAC CGTAAAGGAT TACTACAATA CCGCAAAAGC AGACAAGGAT
AAAGTCAGCT GGAAGATCTA CAAAGGACAC AATTTTGAGT CAGAAGCCAT GTCCTTTGAA
GAAGTAGGTC CCGAACTACA GATGAACTTC GATGCCGTAG GCAGTTACCG CGTGATGGCC
TATGGTACGG ACGGAACGGA TGTTCGCTGT ACGATAGACG TTGCTGTAAC AGTAAACAGA
CTCAAAGGTG ATATCGAACT CGGCGCTGGT ATGGGTCGTA TCGTGGGAAA AGACTATCGT
GTAAGAAGAG GCGTACCCGT AAACATCGCT GCGAAATATG AAATAGAACC TGCCCTCGCG
GAAGAAAAAC AGCTGGTGAG TATGCAGGTC ACAGATATGA ATGGCACTAT TCTGGCCGCC
GGAGAACAGG GAGAAGATAC CATCACCTTC ACTCCCGCCA ACGGCGCAGC CACCTATAAA
GTGACCATCA GTATGGATGG ACAGATCATT ACAAGGGAAC TGACATCCGA AGGGAATGGT
GTGGTAGCTA TCAAAAGTAA TCCTGCCGCA GAAGTAGTCA GACCTGGTAC CGCTATGAGC
TTCCAGGTAA CAGAAATGAC CTACTTCACA CAACTGCAGG AGTTTGAAAC CACTGGTATC
AAATGGCAAC TGAACGGTAA AGACGTCGGC ACCGGACAAT CCATTAGTCT CGGTGGAGAA
CATTTCTCAC GGGAAGGTAA CTATGTCATA GAAGCCTATG TCATGAAAGC AGATGCCTGG
GATGCAAAGA AAGGCGCTCC TTCTTCCCGT CACCAGAAAG ATGATTGCCG TTTCGCCGTG
AAGAAGAACG AAGTCACCGC CATCAAAGTA GAAAACGGTG GCGCTAAATG GGTGGTCGGT
AAACGCTATA ACCTGGAAGC ACTGACCCTG ATGCCTTACC AGGCAGCGCA GGATGGACCT
ATCACCTGGT CCCCCGCTGG TAGCCATACC AATAAAGCCA CAGGCATCTA TGCAACACAT
AAAGGTAAGG TAGCCGTAAC AGCCACCTTG AATGGAAAGA CTAAAAGCCT GGAAGCAGAG
GCGGATACAG CTGAAATCAC CCGCTGGTAT TTTGGTGATA AAGATGGCGT GTATAAACCA
CGCGCCGGCT GGAATGAAAC ACTAAAGCTC ATTATCAATT GCCCTGCCGC TGCCGGAGAA
ACTGTAAATG TACACATACT GGAAGCCGAC AGATCCAGCT TCAATTACAT CAAGGAAATA
CCAAATTGTA AATTTGATGC GAACGGCGAA CTGAAAGCAG ATCTGAATAC CAACGACATC
AAACCCATGC TGAATAAACT CTATTTTGAA GGCAAGGAGT ATGATGTTTT ATTCGCCATC
CAGTCGAAGC CCAATGGAAT ACAATTCGCC AGCATGAAGA CCGTAGAGGC AGATGGCAAA
TCCTTCCTCT TTCCGCAAAA ACAGAGCAAC CAGCGTGGTA GTGAACTAGG CAAATATGTC
TATATCAATT CGGAAAAAGA GGTAGTCAGT GTCAATTTCA TCGACAGTAC CAATTACCCT
GCATATAAGG TCTACAAATA CGGAGAAAAG ATAAAGATCC GTGTACAAAC CCGTAACCTG
GCTGCGCAGG ATCTGACATT GCAGATCTGG CACAATGGAT ATAAACAGGA AGATAAGATG
GTCCTGGAAT TCCAGGGTAA ACCGGATGAC AAAGAATTAT GGGAAGTAGA ACTGGATACC
AATAAACTGA AAAGCGGCAA TAAAAAAATC GATGATGGTC TGCGCAGTTA CTTCGCCCTC
ATCAAAGAGA AAAACGGTGA CACTTTCAAA TTCCCGAAAG AAGTAGCGGA CGCCAATACT
TTTGACCCAA AGAATGTCAG TTTCTATCAG CACATCAAGC TGTCCAATGC ATCAGCAGAC
ACGCTGAATA AACTGACCAA GGATATCGCC CCTACCGTAT TGGGTGAAGC CCTTGAAAAG
GAAGAAAACA AAACCGGTTG TCCGCGTTGT AATGAAGATA TTACGCCAGC CATGCTGAAA
CAGGTCTTCA AACAGGCAGA CGATGCCACC CTCAAAAGCG TAGCAGATAC CTACAATAAA
TATATGCGGG AGATCGGGAT GAACACCTGC TGGAACAAAG CGCACTTCTT TGCACAGACC
TTCGTCGAAT CCGGCCCGTC TCTTCACCTG AAAAGCGGTG AAAGCTTTAA CTATTACTGG
GAAGATCTGG ACGGTCTTTT CCCACCATTC AGAACTACTG CCGGACAAGA AAAAGCACAA
CTCTGGGGCC GTGCAGTAAG AAAACCTGCC ATTCCGGGTG TAACAAAGGA TAATGAGAAA
AACATCGCCA ATTACGCCTA TGGTCCTGAC GCTGCCAAAG GAAAGGAGCT TGGCAATACC
GGCGCTAATG ACGGCTGGGA TTTCCGCGGA AAGGGATTGA TACAGCTGAC AGGTCGTACG
GCCTATGAGT ATGCCAATAC CTATACCAAG AAGGAGAATG CAGATATTGT GGCCAATCCG
GACCTGGTAG TATCTGATGT CAGGATTGCC GTACTCTCGT CTATGGCATT CTGGAAATGG
AAAGGATTGC AGCAGCTCGC CAATGGCAAG ATGGAAGTAA AACCGATCAG TACCAAAGTC
GGAAAAAATG TGACACGCCC CGACGGTACA GATGCCTATA CGGAAAAGAA AGAAGCGTTT
GATAAAAACA CATCTTTACT CTTTAAGGTA AAACAGTGTA CTTACGGTCT GGTACCCGAA
GGAGACAACA ATCTCTACAA GATTGATGTG GATGCTTTCA AATATGAACT GGTGAAGAAA
AACGACGCTT CCAAACAGTA TCAGTTTGAT ATTTATATCG GGGGAAAACT GACGGCTACC
GTCCTGAAGA ATGTCAATGA CAAGAAGCTC CTGCCTTTCC CTGACAGCGG ACCTAACTGG
GGTCGTTTCG GCGGCAGAGA CGGTGGAGAT GATAACTACT CCGATCCGAA AGTAGCTGCG
GCTGCACTTG GCTTCTTTTA TTCATTGCCA AAGAATGGCT ACACGGGTAA ATTGTACTTC
AATGACATGT CTGCCAGCAA CCAACGTAAT CTGGGGCATA AAGGACACGT AAACGGAGAT
GACATTGATA TCCGTTATCC GGGTAGTACT GATGAAGCCG GGGAAGTATT ATGGTCGAAA
GCGAAGGATA GTTACCCGAG TGAAGAAAAA TTTGTGGAAG CGCTGGAAAA TATCCTTAGT
ATTGCTTCAA AGTGGGGCTT TAATACCAAC TATGCCTATA AATCAGGTAT CAAAAACACA
AAAGATGCAG CGCATAGCGT GCACCAGAAC CACTTCCATA TTGGATTGAG ATAG
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| Protein sequence | MAEKHFVVQG AACKCNFGGA PDKLKISAND RDYINDGDGS AKPIASNKDL GQPLEAKTFG
NCSITRSSCS PSITQWQSVY EKVTLTNGGK ILTEESKAIC SVSGSPCISI TFHGQTAAVT
STHFDNVEVQ TMAALNPMAP KPASGKEIPK VKSISGKIET RRPSLEIPSS KVVPMMTARV
NEQLKFTVKD YYNTAKADKD KVSWKIYKGH NFESEAMSFE EVGPELQMNF DAVGSYRVMA
YGTDGTDVRC TIDVAVTVNR LKGDIELGAG MGRIVGKDYR VRRGVPVNIA AKYEIEPALA
EEKQLVSMQV TDMNGTILAA GEQGEDTITF TPANGAATYK VTISMDGQII TRELTSEGNG
VVAIKSNPAA EVVRPGTAMS FQVTEMTYFT QLQEFETTGI KWQLNGKDVG TGQSISLGGE
HFSREGNYVI EAYVMKADAW DAKKGAPSSR HQKDDCRFAV KKNEVTAIKV ENGGAKWVVG
KRYNLEALTL MPYQAAQDGP ITWSPAGSHT NKATGIYATH KGKVAVTATL NGKTKSLEAE
ADTAEITRWY FGDKDGVYKP RAGWNETLKL IINCPAAAGE TVNVHILEAD RSSFNYIKEI
PNCKFDANGE LKADLNTNDI KPMLNKLYFE GKEYDVLFAI QSKPNGIQFA SMKTVEADGK
SFLFPQKQSN QRGSELGKYV YINSEKEVVS VNFIDSTNYP AYKVYKYGEK IKIRVQTRNL
AAQDLTLQIW HNGYKQEDKM VLEFQGKPDD KELWEVELDT NKLKSGNKKI DDGLRSYFAL
IKEKNGDTFK FPKEVADANT FDPKNVSFYQ HIKLSNASAD TLNKLTKDIA PTVLGEALEK
EENKTGCPRC NEDITPAMLK QVFKQADDAT LKSVADTYNK YMREIGMNTC WNKAHFFAQT
FVESGPSLHL KSGESFNYYW EDLDGLFPPF RTTAGQEKAQ LWGRAVRKPA IPGVTKDNEK
NIANYAYGPD AAKGKELGNT GANDGWDFRG KGLIQLTGRT AYEYANTYTK KENADIVANP
DLVVSDVRIA VLSSMAFWKW KGLQQLANGK MEVKPISTKV GKNVTRPDGT DAYTEKKEAF
DKNTSLLFKV KQCTYGLVPE GDNNLYKIDV DAFKYELVKK NDASKQYQFD IYIGGKLTAT
VLKNVNDKKL LPFPDSGPNW GRFGGRDGGD DNYSDPKVAA AALGFFYSLP KNGYTGKLYF
NDMSASNQRN LGHKGHVNGD DIDIRYPGST DEAGEVLWSK AKDSYPSEEK FVEALENILS
IASKWGFNTN YAYKSGIKNT KDAAHSVHQN HFHIGLR
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