Gene Cpin_5881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5881 
Symbol 
ID8362062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand+ 
Start bp7472921 
End bp7473481 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content41% 
IMG OID644968020 
Producthypothetical protein 
Protein accessionYP_003125500 
Protein GI256424847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.717536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.487287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTGT ACTTCATTCC GCTCTTAACC GCGCTAGCAG GCTGGTTTAC AAACAAAATA 
ACCATCTCTC TGCTGTTGAA TATTTTTTCA AAAAAGCAAC AACAATTTGC TGATCAGGTA 
GCAGATTTTG TCTCAAAACA ACTTTTTTCC TTCGACGATA TTCGTCGTCA ATTAGCCGAA 
CCAGAGAAAA TAAAAAGTAT GATTCCGGTA GTTGAAGTAC ATATGGATAC TTTTCTGCGG 
GAAAAATTAC CGGAGGCAAT GCCTGTATTT AAAATGTTCA TCGGAGACAG CACCATCCAG 
CAAGTAAAGA AGGTGTTGGT CGCAGAACTG GATAACATGT TTCCTGAAAT TATAGATCAG 
TATCTGCAGC ATACCGCAAA AGAACTGGAT GTACGACAGC TGATCAGCAG GAAAATAATG 
GGTATCTCCG GCGAACAGTT AAAAGAACAG ATCAAAGGTT CGCTCAGGAA AGAACTGCGG 
ATGGCTGAAC TGGCAGGCGC GCTTTTCGGT CTTGTAATCG GATTATTACA GTTAATGATT 
GCCCTACACC ACACTAACTG A
 
Protein sequence
MSVYFIPLLT ALAGWFTNKI TISLLLNIFS KKQQQFADQV ADFVSKQLFS FDDIRRQLAE 
PEKIKSMIPV VEVHMDTFLR EKLPEAMPVF KMFIGDSTIQ QVKKVLVAEL DNMFPEIIDQ 
YLQHTAKELD VRQLISRKIM GISGEQLKEQ IKGSLRKELR MAELAGALFG LVIGLLQLMI 
ALHHTN