| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5857 |
|---|
| Symbol | |
|---|
| ID | 8362037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7440205 |
|---|
| End bp | 7440729 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644967995 |
|---|
| Product | protein of unknown function DUF892 |
|---|
| Protein accession | YP_003125476 |
|---|
| Protein GI | 256424823 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3685] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0615276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.702479 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAG CATCTAACAC TTTTACCAAC TCTAAACTGG AGCAATTCTT TGTTACTATG
CTCCAGGAAA TGTACTGGTC GGAGCAGCAT CTTGTCAATG TACTTTCCAC CATGACAGGC
GCAGCCACCA ATGATGAACT GATTCAGGCA TTTGACCAGC ACAAACAACA AACCGAGGAA
CACGTAAAGA TTGTCGAAAG GGCATTTGAA ATACTGGGAT TACCTGCAGA AGCAGAACCA
AGTATGGGAT TACAGGGACT CTTTGATGAA GGATGGCAGG TGATAGACGA AACCGACGAA
GGATCTGCAC AGCGGGATGT GGCCCTGATC ATTGCCGCAC AGAAAGTAGA ACACTACGAG
ATTGCCTGCT ATGGCAGTCT GGTAACCCTA GCGGCGACAC TCGGAGAAAC TGATGTAGCA
GACCTGCTGA GAACTGTACT GGCGGAAGAA AAAGAAACTG ATGCGACATT GACGATTATT
GCAGAAAGTA AGATCAATGC GCAGGCAAGT GAGGAAACGA TGTAA
|
|---|
| Protein sequence | MQIASNTFTN SKLEQFFVTM LQEMYWSEQH LVNVLSTMTG AATNDELIQA FDQHKQQTEE
HVKIVERAFE ILGLPAEAEP SMGLQGLFDE GWQVIDETDE GSAQRDVALI IAAQKVEHYE
IACYGSLVTL AATLGETDVA DLLRTVLAEE KETDATLTII AESKINAQAS EETM
|
|---|
| |