Gene Cpin_5850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5850 
Symbol 
ID8362030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7433970 
End bp7434605 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content52% 
IMG OID644967989 
Productchitinase 
Protein accessionYP_003125470 
Protein GI256424817 
COG category[R] General function prediction only 
COG ID[COG3179] Predicted chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGG CTACGCCCGC CAATATCCAG CAATACCTTC CCTATCTGAT TCAGGAAATG 
CCTGTATATC AAATCAATAC GCCTGCAAGA GGTTGCGCAT TCCTGGCACA CCTGGCCCAT
GAAAGCGGTC AATTTAGTGT TGTGACCGAA AACCTGAATT ACAAAGCCGA AAGACTGGTG
AAGGTATTCC CCAAGTATTT TCCTGACGTG GCTGCAGCAC AGCCGTATGC CGGAAAACCG
GAAAAGATCG CTAACAGGGT ATATGCCAGC CGCTTAGGGA ATGGACCTGA AGAAAGCGGA
GATGGCTGGC GCTTCCGTGG CAGGGGGCTT ATACAGTTGA CCGGCCGGAA GACCTATGGT
GATTGCAGTA AGGCCCTGAC CGGTGATAAA AAGACTTTTC AGGACAGCTC TGACCTCCTG
GTGACCCCAC AGTATGCAGT CGCGTCTGCC TGCTGGTTCT GGACCGTTTA TAAGGGCCTG
AACGACATCG CGGACCAGTC CGACAACTGG ACAACCACCT TCAAAGGTAA GATCTACAAC
AAATTCCAGT GGTTGACGAT CAAGATCAAC GGTGGCTTGA ATGGTTATGA CGACAGACTG
GCATTCTGGG AACGTGCAAA GGCCGCTATC CGTTAA
 
Protein sequence
MPAATPANIQ QYLPYLIQEM PVYQINTPAR GCAFLAHLAH ESGQFSVVTE NLNYKAERLV 
KVFPKYFPDV AAAQPYAGKP EKIANRVYAS RLGNGPEESG DGWRFRGRGL IQLTGRKTYG
DCSKALTGDK KTFQDSSDLL VTPQYAVASA CWFWTVYKGL NDIADQSDNW TTTFKGKIYN
KFQWLTIKIN GGLNGYDDRL AFWERAKAAI R