Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5850 |
Symbol | |
ID | 8362030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7433970 |
End bp | 7434605 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644967989 |
Product | chitinase |
Protein accession | YP_003125470 |
Protein GI | 256424817 |
COG category | [R] General function prediction only |
COG ID | [COG3179] Predicted chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCGG CTACGCCCGC CAATATCCAG CAATACCTTC CCTATCTGAT TCAGGAAATG CCTGTATATC AAATCAATAC GCCTGCAAGA GGTTGCGCAT TCCTGGCACA CCTGGCCCAT GAAAGCGGTC AATTTAGTGT TGTGACCGAA AACCTGAATT ACAAAGCCGA AAGACTGGTG AAGGTATTCC CCAAGTATTT TCCTGACGTG GCTGCAGCAC AGCCGTATGC CGGAAAACCG GAAAAGATCG CTAACAGGGT ATATGCCAGC CGCTTAGGGA ATGGACCTGA AGAAAGCGGA GATGGCTGGC GCTTCCGTGG CAGGGGGCTT ATACAGTTGA CCGGCCGGAA GACCTATGGT GATTGCAGTA AGGCCCTGAC CGGTGATAAA AAGACTTTTC AGGACAGCTC TGACCTCCTG GTGACCCCAC AGTATGCAGT CGCGTCTGCC TGCTGGTTCT GGACCGTTTA TAAGGGCCTG AACGACATCG CGGACCAGTC CGACAACTGG ACAACCACCT TCAAAGGTAA GATCTACAAC AAATTCCAGT GGTTGACGAT CAAGATCAAC GGTGGCTTGA ATGGTTATGA CGACAGACTG GCATTCTGGG AACGTGCAAA GGCCGCTATC CGTTAA
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Protein sequence | MPAATPANIQ QYLPYLIQEM PVYQINTPAR GCAFLAHLAH ESGQFSVVTE NLNYKAERLV KVFPKYFPDV AAAQPYAGKP EKIANRVYAS RLGNGPEESG DGWRFRGRGL IQLTGRKTYG DCSKALTGDK KTFQDSSDLL VTPQYAVASA CWFWTVYKGL NDIADQSDNW TTTFKGKIYN KFQWLTIKIN GGLNGYDDRL AFWERAKAAI R
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