Gene Cpin_5843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5843 
Symbol 
ID8362023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7424170 
End bp7424793 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content42% 
IMG OID644967982 
Productdeoxynucleoside kinase 
Protein accessionYP_003125463 
Protein GI256424810 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1428] Deoxynucleoside kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.846725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATATA AATACATTAC AATAGAAGGG AACATAGGCG CGGGTAAAAC GACCCTGGCT 
AATAAACTGT CCGCACATTT CGGCGCAAAA CTGATACTGG AAGAATTTGC AGATAATCCC
TTCCTGCCTA AATTCTATGA AAAACCACAA CAATACGCCT TCCCCCTGGA GCTGTTCTTC
ATGGCAGAAC GTTACAAACA GCTGAAAGAT ATGCTGCAGA TGCAGGATAT GTTCAGCAAC
CTGGTAATTT CAGACTATCT CTTTATCAAG AGCCTCCTGT TTGCCAAGAT CAATCTGAAA
GAAGATGAAT ACAATCTTTA CCAGAAACTT TTTGATATCA TCAATCCTCA GCTCATACAA
CCCGACCTGC TGATCTTCCT CAATGCGCCG GTCAGCAAAT TGCAACAGAA TATAAAACAC
CGCAACCGCT CCTACGAACA GCAGATAGAA GATCAATACC TGATCAATGT ACATGATATG
TACATGCAGT ATATCAGACA ACATCCCGTG CGTGTACTCA TGCTGGATAT GACAAAAATT
GATTTTGTAA AAGATACCGG TGACTTCGAA AAGTTGCTGG CCGCGCTGGA CAAGGATTAC
GAGCCAGGCA TTCACTACCT ATAA
 
Protein sequence
MQYKYITIEG NIGAGKTTLA NKLSAHFGAK LILEEFADNP FLPKFYEKPQ QYAFPLELFF 
MAERYKQLKD MLQMQDMFSN LVISDYLFIK SLLFAKINLK EDEYNLYQKL FDIINPQLIQ
PDLLIFLNAP VSKLQQNIKH RNRSYEQQIE DQYLINVHDM YMQYIRQHPV RVLMLDMTKI
DFVKDTGDFE KLLAALDKDY EPGIHYL