Gene Cpin_5842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5842 
Symbol 
ID8362022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7423662 
End bp7424153 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content50% 
IMG OID644967981 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridin epyrophosphokinase 
Protein accessionYP_003125462 
Protein GI256424809 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.893226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG CAATATTACT TATAGGTGGC AATCTGGGAG ACCGTACAGG GCACCTCCGG 
GAGGCTGTGG AGCAAATAGA CAAACAGGTC GGAAGGGTCG AAAAGCAGTC CTCTCTTTAT
GAAACGGCTG CCTGGGGCGT AGCCGGACAA CCAGATTACC TGAATCAGGC CCTTTTGGTT
TCTACTGAAA TGGATGCACG AACCCTCCTG AACACCGTGC TGGCCATAGA ACATAACATA
GGCCGCGTAC GCCGGCAGAA ATGGGGTGCA AGGGTAATTG ACATTGACGT CATTTTCTTT
AATGATGCCG TCATCAATGA ACCGGATCTC AAAATCCCTC ATCCACAGAT GCAGTTCAGA
CAGTTTGTAC TGGTACCGCT CATGGAAATC CTTCCCGACT GGGAACATCC CGTGCTGCAT
CAGTCCGTCA GCACCTTACT GGCCAACTGC ACCGATCAAC TACCTGCCAG TAAATACACC
GGCATATCCT AA
 
Protein sequence
MNKAILLIGG NLGDRTGHLR EAVEQIDKQV GRVEKQSSLY ETAAWGVAGQ PDYLNQALLV 
STEMDARTLL NTVLAIEHNI GRVRRQKWGA RVIDIDVIFF NDAVINEPDL KIPHPQMQFR
QFVLVPLMEI LPDWEHPVLH QSVSTLLANC TDQLPASKYT GIS