Gene Cpin_5839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5839 
Symbol 
ID8362019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7419937 
End bp7420479 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content47% 
IMG OID644967978 
Producthypothetical protein 
Protein accessionYP_003125459 
Protein GI256424806 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.821842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTA TTAAGTTATT GTTGTTAAGC GGCGTAGTTT TCGGGACATT GATATTCCTG 
ATATCCCTTT TATTTCCGTC AACAGCCATT GTTGAGCGTT CCGGTGTGAT CGATGCGCCT
ATATCAACAG TATATTCCCA GATCAATGAT CTTTCTACCT GGCCTTCCTG GAATCCGTGG
GCGGCCCCGG ATGTGGCGCA AAAGATTGAA TTTTCCAGTC CTGCTGCCGG AGAAGGCGCT
TACTATACCT GGTCAGGCAT GCATCACGAG CGTCCTGTTT CCGGTAAGGT GACGATTAGT
AAAAGTAATA CGGGTAAGGA GCTGGTATAT GCCCTTGATT TCAGCAGTAT GAAACCGATG
ACAGGGACTT TTGAGATTAA ACCATCTGCT GATGGAAATG CGACCGCTAT TCAATGGAGA
GTAGAAACGA AACTCGGGAT GCTACCCTGG TGGAAACTGA GGGGATTTCT GGCGGACAAA
CTGACCGGGC CTCAGCTGGA AAGCGGGCTG ACGAAACTGA AGAATATCTG TGAGAAGAAA
TAG
 
Protein sequence
MRFIKLLLLS GVVFGTLIFL ISLLFPSTAI VERSGVIDAP ISTVYSQIND LSTWPSWNPW 
AAPDVAQKIE FSSPAAGEGA YYTWSGMHHE RPVSGKVTIS KSNTGKELVY ALDFSSMKPM
TGTFEIKPSA DGNATAIQWR VETKLGMLPW WKLRGFLADK LTGPQLESGL TKLKNICEKK