Gene Cpin_5837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5837 
Symbol 
ID8362017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7418306 
End bp7419247 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content47% 
IMG OID644967976 
Producthypothetical protein 
Protein accessionYP_003125457 
Protein GI256424804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.906773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATGC TATTTTTCAG TTTAACTCTC CTGGGACTTT TTACTGCCTC CTGCGGCAAA 
ACCGAAAAGG AAGTAATAAA ACTCACAGGC AATCAGGCTG ATCCCAATGC TCCTTCTTCC
ACATGGAAGG AGCATTGGTT TGAACATAAC CAACTGGTGA AACTTGTCTC CTATAACGCT
GAAGTAGGCG TATATTACGA TGACGATGTT CCTAAAGACA TTACCTGGCC ACAGCGTACC
ATGACCGCTA TCTGGAAGTA TACCAAAGCG ACTTACGGCG CCTTCGGTCA GGACAAGGAC
AAACGTCTCT CTGTAATCCT GCACTTCAAC AAATATGGCG GCGGCCACCC GGCTACTTTC
TTTGATGCAA GTCATGACTA TCGCAATATG ATCGACGTAG GTTCCAACAA TCCATGGACC
GACAGTACAG GATGGAATCT CGATATCGTA GCACATGAAG TAGGTCATAT CGTGGAAGGC
GCCTCCAAAG GCACACACAA TTCCCCTGCT ATGGCTATCT GGCATGACAG TAAATGGATG
GAGATCTACC AGTACGATGT ATACAAGAAT CTGGGATGGG ACAAAGAAGC AACGCGCTGG
TATAATGATA AGATGAATGC AGTTGACAAC TATCCGCAGG CGGGTACGCA ATGGTTTAAA
AACTGGTTTT ATCCTATCTA CCGCGATCAC GGTGGTAAAG ATGTACTGAA CGGCTTCTTT
ACCCTGTTAT CACAACAGTT TCCAACCAGG ACAATCTCCC TGGGTAAAGA ATATACAAGA
GACCTGAATA TGGGTGAATT TGTACACTTC TGGAGCGGCG CCGCTCACAG TAATCTGAAA
CAACTGGCCC TGGACGCCTT CGGTACAAAC GACGAGAAAG GACAGGACTG GACGGTGCAG
TTTGAGCAGG CTCGTAAAGA CTTCCCGAAC ATCACCTATT AA
 
Protein sequence
MRMLFFSLTL LGLFTASCGK TEKEVIKLTG NQADPNAPSS TWKEHWFEHN QLVKLVSYNA 
EVGVYYDDDV PKDITWPQRT MTAIWKYTKA TYGAFGQDKD KRLSVILHFN KYGGGHPATF
FDASHDYRNM IDVGSNNPWT DSTGWNLDIV AHEVGHIVEG ASKGTHNSPA MAIWHDSKWM
EIYQYDVYKN LGWDKEATRW YNDKMNAVDN YPQAGTQWFK NWFYPIYRDH GGKDVLNGFF
TLLSQQFPTR TISLGKEYTR DLNMGEFVHF WSGAAHSNLK QLALDAFGTN DEKGQDWTVQ
FEQARKDFPN ITY