| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5836 |
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| Symbol | |
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| ID | 8362016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7416434 |
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| End bp | 7418296 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967975 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003125456 |
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| Protein GI | 256424803 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.857238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGTT ATACACATAG CGGGATATGT GACAAAGTCA AACACTCGTA CATGAAAAAA
GTCTTTTTAA TATTATCCGC CGTACTGGCA TTGGGTATCA CCGCCTGTAA CAAATATCTT
GATCAGGTGC CTGACGATAT CCTCACCATT GACGACATCT TCAAGTCTAA AACGAACACG
GATAATTTCC TCGCGAATAT CTATTTCTCC TTGCCTAATG AACTGCAACA GCGTTTTACA
GGCAATCAGA ACTCAGGCGC CTGGTACGCG GCCTCAGACG AATCCAAGTA TACCTGGTCG
TTTAACTATA CCAATAATAT GAATACCGGT GCATGGGCGA GCACTGATGG TGAAGTAGAA
ACCTACTGGA CTAATTATTA TAAAGCGATC CGTAATGCTT CCTATTTTGT ACAGAACATT
GACAACGCAA ATTCGGTTGA AGTAAATGAC GGCTTTAAAA AACAATATAA AGCTGAAGCG
CGTGCACTGC GTGCTATGTT TTACTTCTTC ATGGTAAAGA TTTATGGCCC GGTAATCCTG
TTGGGTGAAG CGCCGATCGA TATCAACACG CCGGCTGACC AATTACAGTT CAAGCGTTCT
CACATAGATA CCTGTATCAA CTATATCGTT AGTGAACTGG ACAAAGCGGC TGCTGACCTG
GACGCAAGCG TTCCAGGCGG TACAGAGTTC GGAAGGATCA CCAGCGGTGT TGCGAAGGCC
TATAAAGTAG AAGCGCTGTT ACTGGCCGCC AGCCCACTTT GGAATGGCAA CGCAGACTAT
GCTAATTTCA AAAATCCGGA TGGTACGCCA CTCGTAAGCA CCACTTATGA TGCTGCTAAA
TGGACCAAAG CTGCTGCTGC TGCAAAAGAG TTCCTGGATA CCTATGTGCC GAGTCAATAT
AGCCTGTACA CTGCCAGCGG CCCTGATGCA TTTACTGCAG CTTACAATGC CTGCAGCCAG
GTAACGACTA CTGAATGGAA CCAGGAATGG ATCTATGCAC GATCTAACTC TGGTAGCTAC
ATGCGCTACG ACAGAACACC ATTCCATGCC GGCTTCCCTG CTGAGCAACA TGGTGCAGGT
GCTAATGGCG CTACACAGGC AATGGTAGAT GCTTACTTCA TGGCAAACGG TCTGCCTATC
TCTGATGCAG GTTCCGGTTA TGTAGCAAGT GGTTTCTCCA ACTTTAAAGC ACCATTTGAT
AACGCCGCAA GAAATACCTA TAACCAATGG GTCAACAGAG AACCTCGTTT CTATGTTGGT
ATCACTTACA ACAACAGTTA CTGGCTGTAC CAGACTGGTT CCAATCCGAT CATTACTAAC
ATGGAATTCA AAGGTAACTC CGGTAGAAGT CAGAGTACTT CCGATGTATC TCCTACTGGT
TATATCGTGA GAAAAGACGT AATGCCTAAC GATAACGGTC GCGGTGCTCT CATGCTGAGA
TTAGCGAATA TTTTCCTGGA TTATGCAGAG GCGCTGAATG AATCTTCTCC GGCAAATGCT
GACATCCTGA AATATGTAAA TCTCATTCGT CAGCGTGCAG GCATCCCACA ATATGGTAGC
GGTGAAGGTA TGATTCCGGC GCCTGCTTCA CAGGATGCTA TGCGTGAAGC TATCCGTGCA
GAAAGAAGAG TGGAATTGGC ATTCGAAAGC GTACGTTATT TCGATACCCG TCGCTGGAAA
ATTGCTAAAA CTACCAACAA CGGTCCGATA TATGGTATGA ATATGAATGG CGACGGTACT
GCGTTCTATC AGAAAACACA GATCGAAAAC CGCATCTTTA CTGATAAAGA CTATCTGTTC
CCTATACCAA ACAAGCAAAT CCTGATCAAT CCAAACCTGG CACAGAACCC AGGCTGGAAA
TAA
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| Protein sequence | MTRYTHSGIC DKVKHSYMKK VFLILSAVLA LGITACNKYL DQVPDDILTI DDIFKSKTNT
DNFLANIYFS LPNELQQRFT GNQNSGAWYA ASDESKYTWS FNYTNNMNTG AWASTDGEVE
TYWTNYYKAI RNASYFVQNI DNANSVEVND GFKKQYKAEA RALRAMFYFF MVKIYGPVIL
LGEAPIDINT PADQLQFKRS HIDTCINYIV SELDKAAADL DASVPGGTEF GRITSGVAKA
YKVEALLLAA SPLWNGNADY ANFKNPDGTP LVSTTYDAAK WTKAAAAAKE FLDTYVPSQY
SLYTASGPDA FTAAYNACSQ VTTTEWNQEW IYARSNSGSY MRYDRTPFHA GFPAEQHGAG
ANGATQAMVD AYFMANGLPI SDAGSGYVAS GFSNFKAPFD NAARNTYNQW VNREPRFYVG
ITYNNSYWLY QTGSNPIITN MEFKGNSGRS QSTSDVSPTG YIVRKDVMPN DNGRGALMLR
LANIFLDYAE ALNESSPANA DILKYVNLIR QRAGIPQYGS GEGMIPAPAS QDAMREAIRA
ERRVELAFES VRYFDTRRWK IAKTTNNGPI YGMNMNGDGT AFYQKTQIEN RIFTDKDYLF
PIPNKQILIN PNLAQNPGWK
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