| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5835 |
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| Symbol | |
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| ID | 8362015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7413320 |
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| End bp | 7416421 |
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| Gene Length | 3102 bp |
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| Protein Length | 1033 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967974 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003125455 |
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| Protein GI | 256424802 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.880431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.557328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGCC TATGCCTGTC GGGAATATTT GTCACTACGG CGGTTGTCGC ACAACAAGCC
GAAAAAATCA CCATCACTGG TAACGTAAAG GATGAACTGA GAGCTGCGAT GCCTGGGGTG
ATGATCATCA ATCAGACGTC CAAATCGGGT GTTCCTACTG ATGATAAGGG ACATTTCTCT
ATTGGCGCAA AAAGGGGTGA TACCCTGGTA GCCCGCCTCG TGGGATTTGA ACCATTTCAA
TTTGTGATTA AAACAACGAT CGACTTTGAT ATTACAATGA AAGCTACCAA CAGTTCCCTG
AATGAGGTGG TTGTCGTAGG TTTCGGTCAG CAGAAAAAGA TCAGTCTCGT GGGTGCGCAG
TCTACCGTTA AAATGGAAGA CCTGAAACAG CCTGTAGCTA ACCTGAGTGC GGCACTGGCT
GGTCGTCTTG CGGGTGTTGT TGGTGTTCAG CGTTCCGGCT TACCTGGATC CAATGGCGCA
GATCTATGGA TCCGTGGTAT TTCTACTTTT AATGGCTCAG GCAACAGTGC ATCACCGCTC
GTTGTAGTGG ATGGTGTTCA GGGACGTGAC ATTAACTCAT TCGATCCTGA AGACATTGCA
TCCTTCACTG TACTGAAAGA CGCTGCTGCT ACTGCAGTAT ATGGTGTGGC AGGTGCGAAC
GGTGTTATCA TCATCACCAC TAAAAAAGGA ACTTCAGGTA AGTCCAGCCT GATGGCCAAT
TACAACCAGG GTGTGACGTC CTTTACCAAA AGGCCGGAAC TGACTGATGG CGTAATGTAC
ATGATGCTTC GTAATGAGGC GCAGCGTAAT ACCGGCCTTG CTCCAGAGTA CTCCAATAAT
ACAATCAATG CAACCATTCT GAAACAGGAT CCTTATCTGT ATCCGAATGT AGACTGGCTG
GATGCGCTCT TCAAAGATGT AAGCACAAAC AGACGTGCTA ACTTCAGCGC ACGTGGCGGT
TCCGACAATG CAACTTACTA TGTGTCCCTG GGTTATTATG ACGAGTCCAG CTTACTGAGA
ACGGACAAAT CACAGACCTA TGACGCATCT ACCCGTTTCA AACGCTATAA CTTCACCTCT
AACACTAATA TGAACTGGAC CAAGACCACC AAATTCGATC TCGGTATCCA GGGTTATATT
AGTTCCGTGA ACACACCAAA CGTTAATCCG GAAGATGCAT TCAGAAATGT AATGCAGACT
AACCCGGTGC TCTATCCGAT CATGTACCCG GGCAACCTGG TACCTAGCGT GAACTCACAA
GGTGCACAGC CTAACCCGTA TGCACAGGTT ACACAGACCG GTTTCAAAAA TACATTTAAC
AACCAGGTAT ATTCCAACGC GCGTATTTCC CAGGATCTGT CCGAAATCAC ACCTGGTTTA
TCCGCTTATG CCCTGTTCTC ATTTGACGTA TTCAATAACC ACCAGATTAG CCGCTTCCGT
GATAGAAGTG GATACCTGAT CAACAAGGTA CGTCCTTACA ATGCTGACGG CAGTATTAAC
CTGAACCTGA TCTCCAATGG TAACGATGAA CTGCAATATG GTCGTACAAA CGGCGGCAGA
CGACAGTTCT ACCTGGAAGG TGCAGTGAAC TATGACAGAA ACATTGGTAA GAAAGGCCAC
CTGACTGCGA TGATGCTCTA TAACCAGCGT GAACGTACAG AGGCATTTGC TAATGACCTG
ACAGGTTCCA TTCCATACCG TAGCCTGGGT CTTGCAGGAA GGGGTACTTA CTCTTACGAT
GAGAAATACT TCGCTGAGGT AAACTTTGGT TACAATGGTT CTGAGAACTT CGCACCATCC
AAAAGATTCG GTTTCTTCCC ATCTTTTGGT GTGGGTTGGG TAGTGTCTAA TGAAGACTTC
TTTGAAGGTG CAAAAAGCAG CATACAGTTC CTGAAGATCC GTTATTCTGA TGGTAAAGTG
GGTGATGGAG GTAATGGCGG TCGTCGTTTC GGTTACCTGA CACTGGTTGC CTACGATCCG
CTGGATGCAA ATGGTAATCC ACAGGATCTG GGTCTGGACT TTGGTAAAAA CAGTAACTCT
TTCTCGAGAC ATAGTATTGT GATCACTGAC TATGGTTCCA ATGTAACCTG GGCTACTTCT
CACAAACAGG ACCTCGGTAT CGAATTCAAA ACACTGAACG AACATCTCTC CGTTACTGCT
GACCTCTTTA AAGAAAGACG TTCCGGCGTA TTCCTGCAGA GAGAATCATT GTCCTCTTTC
GTGGGGCTGA ACTCCCGCCC TTGGGGTAAC CTCGGTATCA TCCAGAACAA AGGTATTGAT
GCAACGATCG AAATGTCACC TGTCAAGATC GCTAAAAACA TGACACTGGA TGGTCGCGCT
ACCTTTACAT ACAACAGAGA TAAAGTGATC GAAAATGATC AGCCTAAACA GCCATATGAT
TATATGGACA CTCGTGGGAC CAACTACAAC GCTACTTTCG GTTATGTAGC AGAAGGTCTG
TTTACTGATC AGGCAGATAT AGACAAGCAC GCAAACCAGT CTATATTCGG TACAGTTCAT
CCTGGTGATA TCAAATATGC GGATCTGAAT GGCGATGGCG TTATCACCGC AAATGATAAA
AAACGTATCG GTAATGGCGA CGTTCCTACT ACTGTATATG GCTTCGGTCT GAACCTGACC
TGGAAAAACT TCTACATCGG TGCATTCTTC CAGGGTGTTG CCGGCGCAGA CAGGATGCTG
GGTGGCGATG GTATTATTCC TTTCAACAAC AGCACTGGTC CTGAAAGAAG TAACCTGTTT
GCAATAGCAG AAGACAGATG GACAGAAGAC AATCCTAATC CGCATGCATT CTATCCTCGT
CTGGCATATG GTAACGCAGC CAACAAAAAT AACTCACAGG AGTCCAGCTG GTGGGTAAAA
GATATCAGCT TCCTGCGTCT CAAAACTGCT GATTTCGGAT ATAACCTGCC AAAGGGTCTG
ATGAAAAGGG CACATATCAA AAATGCCCGC CTGTACGTAC AGGGTCTGAA CCTGTTCTAC
TGGAGCAAAT TCAAACTGTG GGATCCTGAG CTGAATACCA GCAACGGTAC CAACTATCCA
AACACCAGGT CTATCAACTT CGGTCTGCAG GCCAACTTCT AA
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| Protein sequence | MGSLCLSGIF VTTAVVAQQA EKITITGNVK DELRAAMPGV MIINQTSKSG VPTDDKGHFS
IGAKRGDTLV ARLVGFEPFQ FVIKTTIDFD ITMKATNSSL NEVVVVGFGQ QKKISLVGAQ
STVKMEDLKQ PVANLSAALA GRLAGVVGVQ RSGLPGSNGA DLWIRGISTF NGSGNSASPL
VVVDGVQGRD INSFDPEDIA SFTVLKDAAA TAVYGVAGAN GVIIITTKKG TSGKSSLMAN
YNQGVTSFTK RPELTDGVMY MMLRNEAQRN TGLAPEYSNN TINATILKQD PYLYPNVDWL
DALFKDVSTN RRANFSARGG SDNATYYVSL GYYDESSLLR TDKSQTYDAS TRFKRYNFTS
NTNMNWTKTT KFDLGIQGYI SSVNTPNVNP EDAFRNVMQT NPVLYPIMYP GNLVPSVNSQ
GAQPNPYAQV TQTGFKNTFN NQVYSNARIS QDLSEITPGL SAYALFSFDV FNNHQISRFR
DRSGYLINKV RPYNADGSIN LNLISNGNDE LQYGRTNGGR RQFYLEGAVN YDRNIGKKGH
LTAMMLYNQR ERTEAFANDL TGSIPYRSLG LAGRGTYSYD EKYFAEVNFG YNGSENFAPS
KRFGFFPSFG VGWVVSNEDF FEGAKSSIQF LKIRYSDGKV GDGGNGGRRF GYLTLVAYDP
LDANGNPQDL GLDFGKNSNS FSRHSIVITD YGSNVTWATS HKQDLGIEFK TLNEHLSVTA
DLFKERRSGV FLQRESLSSF VGLNSRPWGN LGIIQNKGID ATIEMSPVKI AKNMTLDGRA
TFTYNRDKVI ENDQPKQPYD YMDTRGTNYN ATFGYVAEGL FTDQADIDKH ANQSIFGTVH
PGDIKYADLN GDGVITANDK KRIGNGDVPT TVYGFGLNLT WKNFYIGAFF QGVAGADRML
GGDGIIPFNN STGPERSNLF AIAEDRWTED NPNPHAFYPR LAYGNAANKN NSQESSWWVK
DISFLRLKTA DFGYNLPKGL MKRAHIKNAR LYVQGLNLFY WSKFKLWDPE LNTSNGTNYP
NTRSINFGLQ ANF
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