Gene Cpin_5833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5833 
Symbol 
ID8362013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7410601 
End bp7411923 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content46% 
IMG OID644967972 
ProductABC-1 domain protein 
Protein accessionYP_003125453 
Protein GI256424800 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.84733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.500952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAC AGACTAACAT CCCTACCGGA AAAGTTGAAC GTGCCAGCAA ATTTGTTACA 
ACTGGATTAA AAGTAGGTAC CAACTATCTC AAACACTATA CAAAGAAACT CATAGATCCC
TCCACCAGCA GAGAAGAACT GCACGCCGAC AATGCGGAGG ACATTTACGA TACACTCAGC
AATCTGAAAG GAAGTGCGCT GAAGGTGGCG CAGATGCTCA GTATGGACAA GGGAATGCTT
CCCAAAGCCT ATACAGAACG CTTTGCCATG TCACAGTACA GTGCCCCTCC TCTTTCCGGT
CCGCTGGTCA TCAATACATT TGTCAAAACA CTGGGTAAAA CACCCGGACA ATTGTACGAT
AAGTTCGAGA TGCAGGCATC CAATGCAGCC TCTATCGGAC AGGTACACAA AGCAGTAAAA
TGGGAGAAAG ACCTGGCTGT AAAGATCCAG TATCCTGGTG TTGCTAACAG CGTAAAGTCC
GATCTCCGCA TTGTGAAGCC TTTCGCCATC CGCATTGTAG GGATGAATGA AGTGGACATG
GATAAGTATT TTGAGGAGAT CGAAGGCAAA CTGCTGGAAG AAACAGATTA TAAACTGGAG
CTGCGACGCT CAATGGAAGT ATCTGCCCAG TGCGCACATA TTCCCAACCT GGTATTTCCG
GTGTATTACC CGGAACTGTC AAGTGACAGG ATCATTACGA TGGACTGGCT GAAAGGCTTC
CACCTGAAAG AATTCCTGGA ACGCAATCCT TCACAGGAGG CCAGGAACCA GATCGGACAA
GCCCTGTGGG ATTTCTATCA GTTCCAGGTA CATGCATTAA AGAAAGTACA TGCCGACCCT
CATCCAGGCA ATTTCCTGAT GCGGGAAGAT GGTACTGTCG GCGTATTCGA CTTTGGTTGT
ATCAAAGAAA TTCCTGAGGA CTTCTATACC AACTACTTCC TGCTGGTTGA TAAAGAAGTG
CTGAAAGATG AAGCCAGACG GAAGGAAATC TACCTGAACC TGGAGATGAT CCATCCGAAT
GACACGGAGA AGGAAATTGT ATTCTTCTCA GGACTCTTCC AGAAAATGAT TGATATGCTG
ACGCTTCCTT TTACGCAGCA GGAATTTGAT TTCGGGGACG AAACGTATTT TGCAGAGATC
TACGCATACA TGGATTACCT GTACAATCTG AAAGAAGTAA GAGATTCTAA AGTAGCGAGA
GGGTCGCGAC ACTCCTTATA TGTGAACCGG ACCTATTTCG GTTTATATTC TATTCTCAGT
GATCTGAAAG CGAAGGTCGT TACCAGCGAA GCCCGTATAC AAAGCATGTT ACGCCCTGTA
TAA
 
Protein sequence
MKEQTNIPTG KVERASKFVT TGLKVGTNYL KHYTKKLIDP STSREELHAD NAEDIYDTLS 
NLKGSALKVA QMLSMDKGML PKAYTERFAM SQYSAPPLSG PLVINTFVKT LGKTPGQLYD
KFEMQASNAA SIGQVHKAVK WEKDLAVKIQ YPGVANSVKS DLRIVKPFAI RIVGMNEVDM
DKYFEEIEGK LLEETDYKLE LRRSMEVSAQ CAHIPNLVFP VYYPELSSDR IITMDWLKGF
HLKEFLERNP SQEARNQIGQ ALWDFYQFQV HALKKVHADP HPGNFLMRED GTVGVFDFGC
IKEIPEDFYT NYFLLVDKEV LKDEARRKEI YLNLEMIHPN DTEKEIVFFS GLFQKMIDML
TLPFTQQEFD FGDETYFAEI YAYMDYLYNL KEVRDSKVAR GSRHSLYVNR TYFGLYSILS
DLKAKVVTSE ARIQSMLRPV