| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5825 |
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| Symbol | |
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| ID | 8362005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7399948 |
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| End bp | 7400973 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967964 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003125445 |
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| Protein GI | 256424792 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.466187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0531961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAGC CAATGGGAAG AATGTTATAC ATCTATAGTT CCCTGTTTAT TGCCATTGCA
CTGAATATTG CCCGTTTGCT TGCCTTAAAG GAAGACAGCG TTATGGCGAG ATACATGCAT
TTCGATACCG GGGAATGGTT GTTTCAGACG GGGGCCAGTT TCCTGTTTTG TCTGCTGGTA
TTCCTATTGG CAGCACACAA TTTTCAGGGG CCATTCCGCA AATGGACATG GGGCCGGGAA
GGTCGCACCG TTTTATTGCT GCTGCTGTTA TTTTTTTGCT TTACGGCGAT CTGTATCGGG
ATACAAAGGC GTGTATTCGG ACAGGGCTTA TTGCCGGGTA ACGGCATCGG CATGAAATTC
ATGTTGATTC TCATACTAGC AGGTATTGAA CTGAAAATTG TGAATATCCT TCGTATGGCA
AGATTCAGCG AACTGGAAAA CGTTCGTCTG CGTAACGCGC ATCTCAAAAC GGAACTGGAA
CTGCTGAAAG GTCAGTTACA GCCGCATTTC TTTTTTAATG CGCTGAGCAG TCTTTCGGGT
GTGGTGAGGG AAGATCCGGC AAAGGCCCAG TATTACATTA ACCAGCTATC CAGGGTATTC
CGTTATTCTC TACAGCGTGA GGATGATCAC CTGGTGTCGC TGAAAGAAGA ACTGGACGCG
GTACGCGCCT ATGCAGCATT GTTGAAGATG CGGCATGAGG CAGGTTTTGA ACTGATCATC
GATATTCCCG ATACGCTGCT GACAGATAAA CTACCACATA TGTCGCTGCA ACCGCTGATG
GAAAATGCCC TGAAGCACAA TGTTGTGACG GTTGGGAGTC CTTTGCTGGT CATCATTACG
GCAGAAAAGA ACGGAAACAG TACCTGTCTG CTTGTCCGTA ATAATCTGCA ACCTTTATCA
TTTTACCCGC CAGGTACGGG TATCGGGTTA TCAAATCTGA ATGAGCGTTA CCGGATATTA
CTAGAGAAAG AAATCAGTAT TAATAAAACG GCAGCTGATT TTATTGTAAA ACTACCATTG
AAATAA
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| Protein sequence | MNEPMGRMLY IYSSLFIAIA LNIARLLALK EDSVMARYMH FDTGEWLFQT GASFLFCLLV
FLLAAHNFQG PFRKWTWGRE GRTVLLLLLL FFCFTAICIG IQRRVFGQGL LPGNGIGMKF
MLILILAGIE LKIVNILRMA RFSELENVRL RNAHLKTELE LLKGQLQPHF FFNALSSLSG
VVREDPAKAQ YYINQLSRVF RYSLQREDDH LVSLKEELDA VRAYAALLKM RHEAGFELII
DIPDTLLTDK LPHMSLQPLM ENALKHNVVT VGSPLLVIIT AEKNGNSTCL LVRNNLQPLS
FYPPGTGIGL SNLNERYRIL LEKEISINKT AADFIVKLPL K
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