| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5802 |
|---|
| Symbol | |
|---|
| ID | 8361982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7372148 |
|---|
| End bp | 7372744 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644967942 |
|---|
| Product | acetyltransferase, GNAT family |
|---|
| Protein accession | YP_003125423 |
|---|
| Protein GI | 256424770 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.475075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.481451 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCAT TTAATTTTTC CGGCAATGTT GTTCTGGAAG ACGAAAGAGT AATACTCCGA
CCGCTCGTAT TAGCTGATGA TGAATACCTT ATTCCTTTTG CGGTCCAGGA ACCGGAGATC
TGGCAATTTT CTACGGTACC ACCAGCCGGA CCAGGTGGGA TGCGTGAATA TATCCGTACT
GCTACGGAAG CACGTAATGA AGGGAGGGAA TACCCTTTCA TCGTGTTTGA CAAACAGTTA
CAACGATATG CGGGTAGTAC CCGGTTTTAT GATATACAGT TGCGCAACAG CACTTTACAA
CTGGGATATA CCTGGTACGG GAAGGATTTT CAGGGCACTG GTTTAAATAA ACACTGTAAG
TTTTTACTGC TGCAGTATGC ATTTGAGAGA ATGGGTATGG AAAGAGTGGA GTTCAGAGCG
GCACATACCA ATGAAAGAAG CATTGCTGCT ATGAAAAGCA TTGGTTGTAC GGTGGAAGGG
ATTTTGCGGA GTGTGGCACC GAATGTGGAT GGTACCCGGA GAAGCAGCAT TATACTGAGT
ATATTGAAAG AGGAGTGGTT AGGCTCCCTG AAGGAGAGTT TACGGAACCG CCTGTAG
|
|---|
| Protein sequence | MTPFNFSGNV VLEDERVILR PLVLADDEYL IPFAVQEPEI WQFSTVPPAG PGGMREYIRT
ATEARNEGRE YPFIVFDKQL QRYAGSTRFY DIQLRNSTLQ LGYTWYGKDF QGTGLNKHCK
FLLLQYAFER MGMERVEFRA AHTNERSIAA MKSIGCTVEG ILRSVAPNVD GTRRSSIILS
ILKEEWLGSL KESLRNRL
|
|---|
| |