Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5800 |
Symbol | |
ID | 8361980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7367829 |
End bp | 7370375 |
Gene Length | 2547 bp |
Protein Length | 848 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644967940 |
Product | Peptidyl-dipeptidase Dcp |
Protein accession | YP_003125421 |
Protein GI | 256424768 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.882586 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGC TTTTTAACAT AAATGACATC ACGATAAGAA CCGAGCTCAA AACCGGAGAT CTCGGTTATG TAGCTTACAT GCACGGCAGG ATCTATAACA GCGAACTGGG TTACGGCTTT AACTTCGAGC GCTACGTGCT GGAAGGATTG CTGGAATTCT CCCGCCAGTA CGATCCGCAG AAAGACCGTG TATGGATCTG TGAATATAAA GACCGCATTG TTGGCTTTCT GATGGCACTT AGCCGAGGGA AAACCCTGCA GCTAAGGTAT TTCATCATCG AGCCTGAATT CCGTGGCGCT GGCCTTGGAA AAAGGCTGAT GGACAGCTTC ATGGCATTCA TGGATGAACA GCAGTTCGAA CATGCCTATC TCTGGACCAC CAACCAGCAG GATACCGCTG TATCGCTATA CCTCCGCCAT GGTTTTATGC TCACCGAAGA AAAAGACAGC AAGGCTTTCG ACAAACCGCT GACAGAAAAA AGGTACGACC TGTTCAGAAC TCCGAATCCG CTGCTGGAAC CGTACGACAC GCCTTACGGC CTCCCTCCTT TTGACCTCAT CACCCCGGCC CGTTACCTGC CGGCCTTTGA AGCAGCCATG GAGGAACACC GGAAAAATAT AGCACAGATC ACCAGTCTGC AAACGCCTCC CTCCTTCGCA GATACCCTCG AGGCTTTTGA AAAAAGCGCT AGGTTATTAC GTAATGTAAG CGCTGTATTC CATAACCTCA CCTCTGCCAA TACCTCTCCG GAACTGGAAA ACATCTCCCG TCAGCTGGCT CCTATGCTCG CCAGACACAG TGATGATATC TACCTGGATG CGGCTTTATT CAACAGGATA AAAGCCCTGT ATGAAAGAAG GGATGCTCTG ACCCTGACCG GTGAACAGGC AAAACTGCTG GAAAAAGCCT ATAAAGACTT TGTACGCAGC GGCGCTAACC TGGACGCAGA CAAACAAACA AGACTACGCG AGATCAATAA ACAACTGTCA TTACTCACCG TACGCTTCGG ACAGCACCTG CTGGCAGAAA CGAATCACTA CGAAATGGTG ATCACAGCAG AGAAAGACCT CGCCGGTCTC CCCGACTCTC TCATAGAAGC AGCTGCCCTG TCAGCAAAAG CAGCCGGTAA AGAAAGCGGC TGGCGCTTTA CCTTACACAA CGCCAGCGTA ATGCCTTTCC TGCAATATGC GGATCAGCGT CACCTGCGGC AAGAGATCTA TGAAGCATAC ATAAACCGTT GTAACCACAA CGACGAAAGA GATAATAAAG AGATCGTTAC ACAACTCGCA GCCCTGAGAG CAGAAAAAGC GGCGCTGCTG GGATATGCTT CTCATGCGGA CTTCATCCTG GAAGAAAACA TGGCGAAAAC ACCTGCGAAA GCCAATGAAC TGTTACAGCA ATTATGGCAT GCCGCCCTGC CTGTAGCGAA ACAGGAAGCC GTTGAAATGC AGGCGCTCAT GAACCGCGAA GGAAAAGGTG AACAACTCGA AGCCTGGGAT TGGTTCTATT ATGCAGATAA AGTTAGAAAA GAGAAATATG CTTACGATGC AGAAGCATTA CGTCCATACT TCAAACTGGA GAACGTACGG GATGGCCTCT TCTTCACCGC AAAAAAACTC TACGGACTGC ACTTCCATCT GCTGAAAGAC GTTCCGGTTT ACCATGAAGA AGTATCTGCC TACGAAGTAA AAGGCGATGA TGGTACACTG GTCGGATTAC TCTATCTGGA CTTCCATCCC CGTACCTCCA AACGTGGCGG TGCATGGATG ACCTCTTACC GCAAACAAGC CATTAATGCC AACGGACGCG TTGCACCGGT GATCTCCATC GTATGTAACT TCTCCCGGCC AACTGCTACT CAACCGGCTT TATTGACACC GGATGAAGCG GAAACCTTCT TCCATGAAGC CGGTCACGCA TTACATGGCC TGCTGTCAGA TGTGACGTAT GAGACCCTGT CAGGTACCTC CGTACCGCGT GACTTTGTAG AACTGCCTTC TCAGGTAATG GAACACTGGG CATTCGAACC GGAAGTACTG GCGCAATATG CGAAGCATTA CGAAACCGGA GAACTGATCC CTGCAGCACT CGTAGAAAAG ATGAAAGCTG CATCCAGATT CAACCAGGGG TTTGCGACCG TAGAATACCT CGCCGCTTCC CTGCTGGACA TGGCCTATCA CACACTGCCC GCCGGTAACA ATATCGTACC ACTGGACTTT GAAAAAGAAC AGATGGATAC TATCGGACTG ATCCCGCAGA TTGCACCAAG ATACCGCAGC ACTTACTTCC AGCACATATT TGCAGGAGGC TATTCCGCCG GATATTATAG CTATATATGG TCAGAAGTAC TGGATAGCGA CGCCTTTGCC GCTTTCAAAG AAACTGGCAA TATCTTCGAT CCTGCTACTG CACAGGCATT CAGGAAAAAT ATCCTGGAGA AAGGAGGAAC AGGAGAGCCA ATGGACTTAT ATGTTGCTTT CCGTAAAAGA GAACCGGATG TGAAGTACCT GCTGCAACAC AGAGGACTTG AAACAAGTAC GCATTAA
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Protein sequence | MAQLFNINDI TIRTELKTGD LGYVAYMHGR IYNSELGYGF NFERYVLEGL LEFSRQYDPQ KDRVWICEYK DRIVGFLMAL SRGKTLQLRY FIIEPEFRGA GLGKRLMDSF MAFMDEQQFE HAYLWTTNQQ DTAVSLYLRH GFMLTEEKDS KAFDKPLTEK RYDLFRTPNP LLEPYDTPYG LPPFDLITPA RYLPAFEAAM EEHRKNIAQI TSLQTPPSFA DTLEAFEKSA RLLRNVSAVF HNLTSANTSP ELENISRQLA PMLARHSDDI YLDAALFNRI KALYERRDAL TLTGEQAKLL EKAYKDFVRS GANLDADKQT RLREINKQLS LLTVRFGQHL LAETNHYEMV ITAEKDLAGL PDSLIEAAAL SAKAAGKESG WRFTLHNASV MPFLQYADQR HLRQEIYEAY INRCNHNDER DNKEIVTQLA ALRAEKAALL GYASHADFIL EENMAKTPAK ANELLQQLWH AALPVAKQEA VEMQALMNRE GKGEQLEAWD WFYYADKVRK EKYAYDAEAL RPYFKLENVR DGLFFTAKKL YGLHFHLLKD VPVYHEEVSA YEVKGDDGTL VGLLYLDFHP RTSKRGGAWM TSYRKQAINA NGRVAPVISI VCNFSRPTAT QPALLTPDEA ETFFHEAGHA LHGLLSDVTY ETLSGTSVPR DFVELPSQVM EHWAFEPEVL AQYAKHYETG ELIPAALVEK MKAASRFNQG FATVEYLAAS LLDMAYHTLP AGNNIVPLDF EKEQMDTIGL IPQIAPRYRS TYFQHIFAGG YSAGYYSYIW SEVLDSDAFA AFKETGNIFD PATAQAFRKN ILEKGGTGEP MDLYVAFRKR EPDVKYLLQH RGLETSTH
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