| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5785 |
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| Symbol | |
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| ID | 8361965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7355308 |
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| End bp | 7356246 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967925 |
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| Product | protein of unknown function DUF542 ScdA domain protein |
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| Protein accession | YP_003125406 |
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| Protein GI | 256424753 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[S] Function unknown |
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| COG ID | [COG2846] Regulator of cell morphogenesis and NO signaling
[COG4309] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03652] iron-sulfur cluster repair di-iron protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAA TAACAACACT GGACGTACCA GCCCTATCTC CTGCCATCCG GCACCAGACG
CTCATTCAGA CGTTTGAAGC CTTACTGCCC GGCGATAGTT TTATCATACA CAACGATCAT
GATCCACGGC CGCTCTATTA TGAGTTGCTC AGCAAAAAAG GAAATATACT GACGTTTGAA
TATCTCCAGG ACGGACCGGA TCTCTGCCGG GTAATAGTTA AAAAAAGAAC ACAGTCCCCT
GATCAGATCA CCGTGGCTGA CATTACCGCT GCTGACTACC GGAAAGCGGA AGTATTTGGT
AAATATGGCA TAGACTTCTG CTGCGGTGGC AATATTACAT TGAAAGAAGC CGCTGCAAAA
GCCAACATCA CGGAAGAAAC ACTCCTGAGT GAACTGGAAG CAATCACTAA AAATACCCCG
TTCCAGCTGG CAAAGAACTT CATTAACCAG ACAGCTGATG AACTGATCGA TTATATCGTC
AGTACCCATC ATCGCTATGT AAAAGAAAAC ATTCCTGTAA TAGAACAACT GGTCACAAAA
GTCGCAAAAG TACACGGTGC TGAACAGCCG GAACTACAAC ACTTCGAAGC AGGCACACTT
GCTTTTCTGA AAGATCTGCA ATTACATCTT CATAAAGAAG AACACATTCT TTTCCCCGCT
ATCTTACAAC TTGAGAAGGA ACCACATGAT ACTTCCGGAA GAGAGCTGGT ACTAAGTGCT
GTAAAAGTAA TGCGTGCAGA ACATGAAGCA TCCGGAGAAG AACTACAAGC CTTCCGTCAG
CTGACAAACA ACTATACACT GCCGGAAAGC GCCTGTAATA CCTATGCTTT CCTCTTTAAC
AAGATGAAGG AATTCGAAGC TGACCTGCTG ATACATATCC ACCTGGAGAA CAACATACTC
TTTCCTAAAG CGGTACAACT GGAACAGCAG CTATCGTAA
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| Protein sequence | MTTITTLDVP ALSPAIRHQT LIQTFEALLP GDSFIIHNDH DPRPLYYELL SKKGNILTFE
YLQDGPDLCR VIVKKRTQSP DQITVADITA ADYRKAEVFG KYGIDFCCGG NITLKEAAAK
ANITEETLLS ELEAITKNTP FQLAKNFINQ TADELIDYIV STHHRYVKEN IPVIEQLVTK
VAKVHGAEQP ELQHFEAGTL AFLKDLQLHL HKEEHILFPA ILQLEKEPHD TSGRELVLSA
VKVMRAEHEA SGEELQAFRQ LTNNYTLPES ACNTYAFLFN KMKEFEADLL IHIHLENNIL
FPKAVQLEQQ LS
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