| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5782 |
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| Symbol | |
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| ID | 8361962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7351269 |
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| End bp | 7352285 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967922 |
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| Product | cytochrome C oxidase mono-heme subunit/FixO |
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| Protein accession | YP_003125403 |
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| Protein GI | 256424750 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00253495 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTAT TTGATAATCA TAAAAGTCTG TACAGGACCG CTTTCCTGTT GTTCGTTATA
CTTACTGTAT TTGTTGCTAT TATTCCTGCT ATGAACAACC AGCGTAACAA TGCACCTTTA
CCGGAGGCAC CGGTATTGAG TCCGGCGGCA GTGAAAGGAA AGGCGTTGTT TGTGAGCAAT
GGTTGTGTGG CTTGTCACAC GCAGCAGGTC CGTAATGTTG AGATGGATAA AAAATGGGGT
TCAAGACCCA GTATTGCGGC AGATTATGCC GACAATCACC GTACTGATTT CTGGCGGAAT
ACGGCTACGC TGATGGGTAC AGAACGTACC GGCCCTGATC TTACAGATAT TGGCACCCGT
CAGCCGAGTG AGGACTGGCA CCTGACACAC CTGTTCAATC CACGTATCGT AGCACCTGCA
TCTGTTATGT CGGCTTATTC CTGGTTATTT ACAGAGAAGA AAGAAGCGGC TAAAAATGAT
GTGGTGGTAA AGATACCGGA TGAATACAAG GAGGAAGGGA CCGTTATTGT GGCAACGCTA
CAGGCTTTAC AACTGGTGAC TTATTTAAAG GAGCTGAAAC AGGTGAAGCT GCCGGATGGT
ACGGAGACAC CTGCTTTCCT GTATGCGCAA AAAGCTTCCG CGGCAAATGC TACTACCGGA
GCCGCTGCAG GGGCGCCTGA CGGAACGACC TTGTACGCTA ATAACTGTCA GAGTTGTCAT
CAGCAGAATG GAGAAGGATT AAAAGGGGCT TTTCCGCCAC TGAAAGACAG CAAGATCGTA
CTGGATCCTG AACCGCTGCA ATACGTCAAT ATCATCATGA ATGGTTATGA TGGTCGTGTC
AGTGAGGGCT ATGGCGTTAT GCCGGCAGTA GGTGCGAATG CGAATCTGTC AGCAGAAGAA
GTGACCGCTA TTATGAACCA TGAGCGTACC AGCTGGGGGA ATAATGCGCC AAAGGTGACG
GTAGAGCAGG TACGGAAGTA CCTGGAGGAA ACAAAGGCAA AAGCCACCGC TCAATAA
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| Protein sequence | MELFDNHKSL YRTAFLLFVI LTVFVAIIPA MNNQRNNAPL PEAPVLSPAA VKGKALFVSN
GCVACHTQQV RNVEMDKKWG SRPSIAADYA DNHRTDFWRN TATLMGTERT GPDLTDIGTR
QPSEDWHLTH LFNPRIVAPA SVMSAYSWLF TEKKEAAKND VVVKIPDEYK EEGTVIVATL
QALQLVTYLK ELKQVKLPDG TETPAFLYAQ KASAANATTG AAAGAPDGTT LYANNCQSCH
QQNGEGLKGA FPPLKDSKIV LDPEPLQYVN IIMNGYDGRV SEGYGVMPAV GANANLSAEE
VTAIMNHERT SWGNNAPKVT VEQVRKYLEE TKAKATAQ
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