Gene Cpin_5779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5779 
Symbol 
ID8361959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7350158 
End bp7350556 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content49% 
IMG OID644967919 
Productglobin 
Protein accessionYP_003125400 
Protein GI256424747 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00168244 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATG TTGAGAAGGG GCCGCAGTTG GCGGATATTC AGACAGACGA AGATGTAAGG 
CAGCTGGTGT ATACCTTTTA TGACAAGGTG AGGGCGGATG CATTACTGGG GCCGGTATTT
GAAAAAGCGA TCGGAAGCGA CTGGGAGCCG CATCTACAGA TCATGTGCAA TTTCTGGAGC
ACGATGTTGT TGTATTCCGG CAAGTACCGG GGCGATCCGA TGAGTAAACA TATGTCGTTG
CCGATTGATC CGCAGCATTT CAGTCAGTGG CTGGCGCTTT TTACGGCTAC CCTGGATAGC
CTTTTTAAAG GGGAGGTGGC CGACAATGCA AAAGCACGGG CTAATAATAT AGCCAGGATC
ATGCAGTCGA TGCTGGGTTT CCCTTTGAAT AATAAATAA
 
Protein sequence
MADVEKGPQL ADIQTDEDVR QLVYTFYDKV RADALLGPVF EKAIGSDWEP HLQIMCNFWS 
TMLLYSGKYR GDPMSKHMSL PIDPQHFSQW LALFTATLDS LFKGEVADNA KARANNIARI
MQSMLGFPLN NK