| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5776 |
|---|
| Symbol | |
|---|
| ID | 8361956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7348617 |
|---|
| End bp | 7349201 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644967916 |
|---|
| Product | phosphoesterase PA-phosphatase related |
|---|
| Protein accession | YP_003125397 |
|---|
| Protein GI | 256424744 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00125534 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAT TTTACACTAC GGTATTACTG CTGACAACGG CCTACTCCCC CATCCTAGCC
CAGTCAAGGC TGCAGACTTT CGACGATCGT ACACTGGAAT ACCTGGCTGC CAGAAGGACG
CCCGGACAAA CAAAAACCTG GCTCCTTATT TCCAACACCA ATGACTATGT GAATGTAGCG
ATACCTGCCG GCCTGCTGGT AGCGGGTATT ATTGATCACA ATCCCGATAT GCGGCAAAAT
GCCCTTTACG TCGCCAGCAG TACAGCCACC ACCTTTCTGC TGAACACACT TATTAAGAAA
CTGGTAAAAC GTCCCCGGCC GTTTATTTCC AATACACACC TGACGGCCGT CTATCAGCCA
AAGTCCACCT CCTTCCCCTC GGGGCATACT TCTTCTGCTT TCAGCTCGGC AACTGCACTT
GCCAGGGCTT ACCCGAAATG GTATGTTCTC GCACCCGCTT TCCTCTGGTC AGGCGCGGTG
GGATATTCCA GGATGTATCT GGGCGTTCAC TATCCGACAG ATGTAACAGC AGGCGCGCTG
CTCGGTGTAG GTACCGCATT TGGAATGGGT TTTATCAGAC CATAA
|
|---|
| Protein sequence | MKQFYTTVLL LTTAYSPILA QSRLQTFDDR TLEYLAARRT PGQTKTWLLI SNTNDYVNVA
IPAGLLVAGI IDHNPDMRQN ALYVASSTAT TFLLNTLIKK LVKRPRPFIS NTHLTAVYQP
KSTSFPSGHT SSAFSSATAL ARAYPKWYVL APAFLWSGAV GYSRMYLGVH YPTDVTAGAL
LGVGTAFGMG FIRP
|
|---|
| |