Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5773 |
Symbol | |
ID | 8361953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7346710 |
End bp | 7347621 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644967914 |
Product | Methyltransferase type 12 |
Protein accession | YP_003125395 |
Protein GI | 256424742 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.418768 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAGTC CTGTTACAGG TGGTAATCGC CTTGAGTTGA TCACTACGTT TCCGACAGAA TCAATAATTA AGATTTACGA AGATGAGCTA AAGGTGGATA CGCGTCGTTT CTTCAAGGGG GTACCTGCTG TAGAATTGTA TGAGTGCCGT GATACCGGAT ACCGGTTTTA TTATCCGGAG GGCATTCTGG GAGATGGGCA GTTCTATGCT GACCTGAATA AAGACGATGT AGGATATTAT TCCACCACCC GATGGGAACA TACATATGCT ACCAGTCTGA TCAAACCCGG TCAGAAGGTA TTGGAAATCG GTGCAGGCGA CGGCTTTTTC CTGGAACAGC TGAAAAAGTC CAATATCGAT GCGATTGGCC TGGAATTGAA CGTTGCCGCT ATTGCAAAAG GTGAGAAGAA GGGACTGCGC ATGTATAACG AGATGATCGA AGACCATGCG GATGGGCATG TCGGAGAATA TGACGTTGTT TGCTGTTTTC AGGTACTGGA GCATATCTAT AATGTGAAGA GCTTTCTGGA TGCCAGTCTG AAAGCGCTGA AGAGAGGGGG TAAACTAATC ATCGGGGTGC CTAACAACAA TCCTTATCTC TTCAAACAGG ATAAATGGCA TACGCTTAAC CTGCCTCCAC ATCATGCCGG TTTGTGGAAC AAAAGGGCTT TTACCGAATT GCAGAAGTTC TACGATGTGA CACCACAGGA CATTATTGTT GAACCATTAA GTAATAATAA ATCATTTGCA AGACGTTGGT ATCTGGCGCA ACGTAACTAC TATAAAGAAA AGAAATCTTT CCTGGGTGGG CTTATTTCCA TTATTCCTGC ACCAATAGGA AAAATGGTTG TTAAGCTGTT TTCTCCATGG ATCGACGGCT TTAATATCGT GGCGGTATTT ACCAAAAACT AA
|
Protein sequence | MKSPVTGGNR LELITTFPTE SIIKIYEDEL KVDTRRFFKG VPAVELYECR DTGYRFYYPE GILGDGQFYA DLNKDDVGYY STTRWEHTYA TSLIKPGQKV LEIGAGDGFF LEQLKKSNID AIGLELNVAA IAKGEKKGLR MYNEMIEDHA DGHVGEYDVV CCFQVLEHIY NVKSFLDASL KALKRGGKLI IGVPNNNPYL FKQDKWHTLN LPPHHAGLWN KRAFTELQKF YDVTPQDIIV EPLSNNKSFA RRWYLAQRNY YKEKKSFLGG LISIIPAPIG KMVVKLFSPW IDGFNIVAVF TKN
|
| |