Gene Cpin_5770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5770 
Symbol 
ID8361950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7344429 
End bp7344989 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content43% 
IMG OID644967911 
Producthypothetical protein 
Protein accessionYP_003125392 
Protein GI256424739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA TGCCCGGCCT CTTCGGGGAT GATGATCTGT TTGAAGACTT TTTTGTGAAA 
GTTGTTCATT TTGATTACCG TGAAAATCCA GGAATCATCC GAAAAATCGT TACCAGTGAG
AAGATGCTAA AGGATTTTAA GGAGGAAGAA AACATGATGG TCAGCACTAA ACATCGCGAC
AGGGATTACG TAGATGATCT CAAGAGGTGG AAGCTTAGAA AGCAGATTAT TAATGAGCTA
TTTACCTTAA ACAGACCGGG TAATGAAGAA GAGATAACGC AGGGGGCTGG CTATCTCGCC
GATCTTGCTG TCAGTCCGGA GTACCAGCAA TTCGGTATCG GTAAGCAACT ACTGGCAATC
ACGAAACAGC GGGTAGGAGA AGAGTCTATG ATCTTATTAT TGTCGGTGCC AGACGCAATG
GAGTATTATC CCAAGGTGGG ATTTTCAAAA GAAGACCGGG GCTTTATCAT GCATCGAACG
AAGCAGTATT ACGTATTGTT ATCACAAATA TCCTCCTTAT TTCCCACGCC CACGATACAC
ATTCACCACA TACCTACCTG A
 
Protein sequence
MKIMPGLFGD DDLFEDFFVK VVHFDYRENP GIIRKIVTSE KMLKDFKEEE NMMVSTKHRD 
RDYVDDLKRW KLRKQIINEL FTLNRPGNEE EITQGAGYLA DLAVSPEYQQ FGIGKQLLAI
TKQRVGEESM ILLLSVPDAM EYYPKVGFSK EDRGFIMHRT KQYYVLLSQI SSLFPTPTIH
IHHIPT