| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5746 |
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| Symbol | |
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| ID | 8361926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7310284 |
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| End bp | 7310919 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967887 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_003125368 |
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| Protein GI | 256424715 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000252164 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.731688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTG ATACACCATT CCTCCGCAAA CTGGACCAAC ACCGTAAATT CCTTTTAGGA
TATCGCCTGG CTTTTGAGAC CAGTTCACAG CGCTCAAGCT GGCGCCAGAT TGTAATGCTT
TGGTTTTCTG CCGCTTCGCA GGGAAACAAA AGAGCGCAGT TTTATCTGGC TACCTGCTAT
GATAACGGAA TGGGTGTACA ACGGGACACG GCCATTGCCT TCAAATGGTA TATGAAAGCT
GCATTACAGG GCCACATGGA GTCACAATAC AATGTAGGAT TCTTTTATCG TGAAGGAGAT
GTTGTCAGAC AAAACGATAA AAAAGCCGTT TACTGGTTCA AACTGGCTTC TGCACAGGGA
GATACAGAAG CGCAACGCGA TCTGGGCTAC TGTTATTTCT ACGGCCTTGG CATAGAGAAA
GACGTCACAC AGGCTATCTT CTGGTACAAG AAAGCAGCTG CCAAAGACGA TCCTAAAGCG
CTGTACAATC TCGGACTCTG CTACAAACAC GGTGACGGCG TCGGCCAGTC TCAGCGTTGG
GCAAAATATT ATTTCGAAAG AGCAGCCCGC CTGGGCAATA ATGCCGCTTC TCTTCAGTTA
CGCGAGATCA TGCGTACCAC CAGCCAATAT TCTTAA
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| Protein sequence | MKSDTPFLRK LDQHRKFLLG YRLAFETSSQ RSSWRQIVML WFSAASQGNK RAQFYLATCY
DNGMGVQRDT AIAFKWYMKA ALQGHMESQY NVGFFYREGD VVRQNDKKAV YWFKLASAQG
DTEAQRDLGY CYFYGLGIEK DVTQAIFWYK KAAAKDDPKA LYNLGLCYKH GDGVGQSQRW
AKYYFERAAR LGNNAASLQL REIMRTTSQY S
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