Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5740 |
Symbol | |
ID | 8361920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7302619 |
End bp | 7303959 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644967881 |
Product | glycoside hydrolase clan GH-D |
Protein accession | YP_003125362 |
Protein GI | 256424709 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0770281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.815155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAG TTTTGCTATG GACCTTTGTC CTTTTAGGCT GTTCAACATT CGCACAACAA AAGAAAGATT TTCATTCCTG GGCGCCTACA CCGCCAATGG GATGGAACAG CTGGGATTGT TATGGACCAA CCGTAACAGA AGCAGAAGTA AAAGCCAATG CCGACTATAT GGCCAGCCAT CTGAAATCAT CAGGATGGCA ATACATTATA GTAGACATCC GCTGGTATGT GGCCAATGAT AAATCACATG GTTATAATGA AACCGATCCT GCATATAATA TCGACGCCTA CGGACGTTTC CAGCCTGCCG TCAACCGTTT CCCTTCCGCC GCAAACGGAA AGGGATTTAA ACCACTGGCA GACTATATAC ACAGTAAAGG ATTAAAATTC GGCATCCACA TTATGCGGGG AGTACCCGTA GTAGCGGTTA ATAAAAAACT GCCTGTGAAA GGTACTAATG TCACTGCTGC GGATATCTAC AGCAAACAGG ATCAATGTAA ATGGCTGCAT GATATGTATA CCATCGTGCC GGATAAAACA GGCGCACAGG AATATTATAA CTCCCTGTTT GATATGTATG CAGCCTGGGG ACTTGACTTC GTAAAAGTAG ATGATCTCTC CGCCCCTATT TACTTTACTG AAGAGATTGA AATGATCAGA AAAGCGATCA CCCGGACAGG CCGTAAAATA CTGCTCAGTA CTTCTCCGGG GGAAACCCCC ATCGCACAGG GCGCACACGT ACAGCAACAT GCAAATATGT GGCGTACTGT CGATGATTTC TGGGATAACT GGCCCCACCT GAAAGACCAT TTCGAAGTAT TTGATCGCTG GAATAAATGG CGTACTACCG GCGCATGGCC TGACGGAGAC ATGTTGCCAC TCGGACATAT CGGCATCCGT GCAGAAAGAG GACAACCACG GATGACCTCC TTTACAAAAG ATGAACAATA CACCTTAATG ACACTCTGGA CGATCTTCAG ATCGCCATTA ATGTTTGGAG GTAACCTGCC CGACAATGAT CCTTTTACCC TGTCACTACT GACCAACAAA CAGGTATTAC AGGTACTGAA TAACAGCAGT AATAACCGGC CGGTTTTTAA TGATAAAGAC AAAGCTGCCT GGACGGCGGA TATGCCTGGG AAATCAGCAA AATACCTGGC AGTTTTTAAT AAAGCAGATA AGGATGCTGC AGCTGTGAAT GTGGATCTCT CTGAGATAGG AATCAAGGGT AGCTGTACCA TCACTGACCT GTGGACAGGA AAAGTGCTGG GAAAATTCAC GGGTAGTTTT GCTCCGCAGA TCAATCCGCA TGGTGCAGGA TTATATAAAG TCACACCCTG A
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Protein sequence | MKSVLLWTFV LLGCSTFAQQ KKDFHSWAPT PPMGWNSWDC YGPTVTEAEV KANADYMASH LKSSGWQYII VDIRWYVAND KSHGYNETDP AYNIDAYGRF QPAVNRFPSA ANGKGFKPLA DYIHSKGLKF GIHIMRGVPV VAVNKKLPVK GTNVTAADIY SKQDQCKWLH DMYTIVPDKT GAQEYYNSLF DMYAAWGLDF VKVDDLSAPI YFTEEIEMIR KAITRTGRKI LLSTSPGETP IAQGAHVQQH ANMWRTVDDF WDNWPHLKDH FEVFDRWNKW RTTGAWPDGD MLPLGHIGIR AERGQPRMTS FTKDEQYTLM TLWTIFRSPL MFGGNLPDND PFTLSLLTNK QVLQVLNNSS NNRPVFNDKD KAAWTADMPG KSAKYLAVFN KADKDAAAVN VDLSEIGIKG SCTITDLWTG KVLGKFTGSF APQINPHGAG LYKVTP
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