| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5739 |
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| Symbol | |
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| ID | 8361919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7300047 |
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| End bp | 7302614 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967880 |
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| Product | alpha-L-arabinofuranosidase domain protein |
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| Protein accession | YP_003125361 |
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| Protein GI | 256424708 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.393547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.654215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACT GGTTATATCT CGCCGTGCTG ACGTGCCTGA CGCATACCGT TTGGGCCAAG
AATGATCCTG ACTCTGTCTA CCTTTTCTCT TATGCGACGG AGAAAAACAA CCATCATAAC
GGACTGCATT TCGCCTGGAG CCGAGATCAA GAGCAATGGC ATCCCATCGG CAACGAATGG
GGATACCTGA AAAGTGATTA TGGCAGATGG GGCGCAGAAA AAAGGATGTT CGCGCCTTAC
CTGATCAGCG GACCGGATGG CAACTGGCAT TGCGTCTGGG GATTAAATGA CAAGGAACAT
GTCTTTGCAC ATGCCGCTTC CCCGGATCTC ATTCACTGGA AACGCCAGAG CTATCCTGTC
ATGCAGGCCG GCAGCAATGT GTTACAGCCT GTCAGCTGGT ATGATGCCGC ACAACAACAA
TACAACATCA TCTATACCAC TTCCGACAAT AAATACTACC AGACCACTAC CAAAGATTTC
ACCACCTATT CCCCGGCAGC TGAAGTACCG GCAAGCGCTT ATCGCCATCA TACGATCTCC
GTGAACTTAC CCTCAGGTAA AACAAGCGGA CAGCTGCATC GCGTGCCCTG GAAGGTAGCT
GATCAGCTGA TCAAAACATA TGAAGGGAAA CTATATAAAA TGGAACAGTA TAGTGAGTCA
ACTGCCCGTG ACAGTGCCCG TTTTGCAGGT ATCAGTAATC TAAAAGCTAC TATCACTATA
CAGCCAGAAC TGGCTAAACC CATCAGCGAC CTGCTTTTCG GCGTCTTCTT CGAAGATATT
AACTATGCAG CCGACGGCGG GTTATACGCG GAACTGATCC AGAACAGGGA CTTTGAATAT
GCACTCTCTG ACAAAGAAGG TCGTGATCAA CAATGGACGC ACACACATTC CTGGCAACTA
CGAGGCACAC AAAGTACCTT CACGGTTGAT ACGACAGCTC CTTTACACGG CAATAACCGG
CATTACGCGG TCTTAGACAC TAAGGAACCA GGAGCTATAT TGTCAAATAC CGGTTTTGAT
GGCATCTCCG TCAGCAAAGG CGAAAAATAT CAGTTCTCCC TGTTCAGTAA AGGAAAAGGC
AAACTGCAGG TGAGACTGGT CGGCCAGGAT AATGCAGTAC TGGCTCAGAC TACCTTATCA
CTCAACACCC CGGACTGGCG GCAATACAAG GCGACTCTGA CGGCCGGTAG TACCACCGCA
AACGCGCATC TGGAGCTGTT GCCCCTTACT AAAGGTGGAC TTGACCTGGA CCTGATCTCC
TTATTCCCCG CTAAAACCTT CAGGAACAGA CCCAACGGAC TCCGTCCTGA TCTGGCACAA
ACCATCGCTG ATATCCATCC CCGCTTCATT CGTTTTCCCG GTGGATGTGT GGCACATGGG
GATGGTCTTG GCAATATGTA CCGCTGGAAA AACACCCTCG GTCCGCTGGA AACACGTAAA
CCCCAACGTA ACCTGTGGGG ATATCATCAG TCTGCCGGAC TGGGCTACTT CGAATACTTC
CAGTATTGTG AAGATATCGG CGCAGAACCA CTACCCGTTG TTCCCGCTGG CGTACCCTGT
CAGAATTCGG GCGTAGGTGG CGGCGGACAA CAAGGCGGCA TTCCTATGAC CGAAATGGAC
GACTATGTAC AGGAAGTACT GGACCTGGTA GAATACGCCA ATGGCAACGT CAGTACCACC
TGGGGAAAGA AACGTGCGGC TGCTGGTCAC CCGGCTCCCT TCCACCTGAA ATATATCGGT
ATCGGCAATG AAGACCTGAT CACAGATGTA TTCGAAGAAA GGTTCACCAT GATCTATAAA
GCCATGCAGG CAAAACACCC GGAAATTACC GTCATCGGCA CCGTCGGCCC CTTTTACGAA
GGCACCGACT ATGAAGAAGG ATGGGCGCTG GCAGAAAAGC TGAAAGTACC GATGGTGGAC
GAACATTACT ACGAAACATC GGGTTGGTTC ATCAACAACC AGGATTTCTA TGATAAATAT
GACCGCTCCC GTTCTAAAGT TTACCTGGGT GAATATGCAG CACATCTGCC AGGGGCAAAA
GTAAACCTGG AAACAGCCCT CTCAGAAGCT ATCTACCTGA CAGGTGTGGA AAGAAACGGA
GATATAGTAA GTATGACCTC TTATGCACCT TTACTGGCAA AAGAAGGGCA TACACAATGG
AATCCTGACC TGATCTATTT CAATAATACA GACATTAAAC TCACTACCGG TTACCAGGTG
CAAAAGCTAT TCGGGAATAA TGCAGGCAAT GAATACCTGC CTAATACTAT CTCCCTCTCT
ACCAACAAGA AAACGCTGAA CAAAAGAATA GCGGTATCTG TCGTGCGGGA TAGCAAAACC
AAAGATGTAA TCATAAAGCT GGTGAACATC TCCCCCTTCA GTATTCCTTC AACAATAGAC
CTGGGCGCAC TGAACATCGC CGGTAAAACA GGCGTCATGA CCACCTTACA GGGAGATCCG
TCTTCCCGGG ATGCTAAACC TGTCAGCACC AATATCACCG TAGCATCCAC ATTCAACACC
GGCTTACCGG CATATTCGTT CTCTATTATC AGGATCAAAA CAATGTAA
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| Protein sequence | MKHWLYLAVL TCLTHTVWAK NDPDSVYLFS YATEKNNHHN GLHFAWSRDQ EQWHPIGNEW
GYLKSDYGRW GAEKRMFAPY LISGPDGNWH CVWGLNDKEH VFAHAASPDL IHWKRQSYPV
MQAGSNVLQP VSWYDAAQQQ YNIIYTTSDN KYYQTTTKDF TTYSPAAEVP ASAYRHHTIS
VNLPSGKTSG QLHRVPWKVA DQLIKTYEGK LYKMEQYSES TARDSARFAG ISNLKATITI
QPELAKPISD LLFGVFFEDI NYAADGGLYA ELIQNRDFEY ALSDKEGRDQ QWTHTHSWQL
RGTQSTFTVD TTAPLHGNNR HYAVLDTKEP GAILSNTGFD GISVSKGEKY QFSLFSKGKG
KLQVRLVGQD NAVLAQTTLS LNTPDWRQYK ATLTAGSTTA NAHLELLPLT KGGLDLDLIS
LFPAKTFRNR PNGLRPDLAQ TIADIHPRFI RFPGGCVAHG DGLGNMYRWK NTLGPLETRK
PQRNLWGYHQ SAGLGYFEYF QYCEDIGAEP LPVVPAGVPC QNSGVGGGGQ QGGIPMTEMD
DYVQEVLDLV EYANGNVSTT WGKKRAAAGH PAPFHLKYIG IGNEDLITDV FEERFTMIYK
AMQAKHPEIT VIGTVGPFYE GTDYEEGWAL AEKLKVPMVD EHYYETSGWF INNQDFYDKY
DRSRSKVYLG EYAAHLPGAK VNLETALSEA IYLTGVERNG DIVSMTSYAP LLAKEGHTQW
NPDLIYFNNT DIKLTTGYQV QKLFGNNAGN EYLPNTISLS TNKKTLNKRI AVSVVRDSKT
KDVIIKLVNI SPFSIPSTID LGALNIAGKT GVMTTLQGDP SSRDAKPVST NITVASTFNT
GLPAYSFSII RIKTM
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