Gene Cpin_5724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5724 
Symbol 
ID8361904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7287478 
End bp7287990 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content49% 
IMG OID644967865 
Productmethylated-DNA/protein- cysteinemethyltransferase 
Protein accessionYP_003125346 
Protein GI256424693 
COG category[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.611382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.680724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACT TTTATAAGTA CATGAATACG CCTGTTGGCA GGTTGACGCT GATCGGCAGT 
GACGAAGGAC TGGCGGCTAT TCTATGGGAG AATGATAATC CCGGCAGAGT ACGTCCGAAA
GCAGATGTAA GAAATGATCA GCATCCGGTA CTGATCGAAA CAGAACGTCA GTTACAGGAA
TACTTTAATG GCGAGCGGAA TGAGTTTGAT ATAACGCTTG CGGCGATCGG CACTGACTTT
CAGAAAAAGG TATGGAATGC CTTATCGACG ATTCCTTATG GTCAGACACG CAGCTATACA
CAGATCGCAC ATCAGATAGG TAAACCCCAA GCAGTACGTG CAGTAGGCGC TGCCAATGGC
AGAAATCCTA TTTCGATTAT TGTGCCCTGT CACCGGGTAA TCGGTGCATC CGGATCGCTG
ACCGGCTTCG CCGGAGGACT TCCTGCAAAA GCATCACTAT TGTCGTTGGA AGATACGAAC
GGAGGCGCGT CACAGCTTTC CCTTCAATTA TAA
 
Protein sequence
MQHFYKYMNT PVGRLTLIGS DEGLAAILWE NDNPGRVRPK ADVRNDQHPV LIETERQLQE 
YFNGERNEFD ITLAAIGTDF QKKVWNALST IPYGQTRSYT QIAHQIGKPQ AVRAVGAANG
RNPISIIVPC HRVIGASGSL TGFAGGLPAK ASLLSLEDTN GGASQLSLQL