Gene Cpin_5711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5711 
Symbol 
ID8361891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7281272 
End bp7281499 
Gene Length228 bp 
Protein Length75 aa 
Translation table11 
GC content38% 
IMG OID644967853 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003125334 
Protein GI256424681 
COG category[K] Transcription 
COG ID[COG3655] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATTA TTGTAAACCT GGACGTGATG ATGGCAAAGC GAAAAATATC TCTAAATGAA 
CTTTCAGAAA GAGTTGATTT GACATTATCC AATCTTTCTA TATTAAAGAC AGGAAAAGCA
AAAGCAATTC GTTTTAGTAC CCTGGAAGCG ATCTGCAGGG CATTGGATTG TCAGCCGGGA
GATATTCTGG AATACGTCAA TGACGAAAAA GGAACAACAA ATCCCTAG
 
Protein sequence
MPIIVNLDVM MAKRKISLNE LSERVDLTLS NLSILKTGKA KAIRFSTLEA ICRALDCQPG 
DILEYVNDEK GTTNP