Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5705 |
Symbol | |
ID | 8361885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7271666 |
End bp | 7272160 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967847 |
Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
Protein accession | YP_003125328 |
Protein GI | 256424675 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGG TAGAAGTAGG CATTATTATG GGCAGCAGTT CTGATGCGCC TACCATGCGT CAGGCAATAG AGGTGTTAAA GAAATTCGAC ATAGGCTATG AATTTAGCGT TGTGTCAGCA CACCGTAGCC CCCAAAGAAT GTTTGACTAT GCAGCTACCG CTGAAGAGCG TGGTTTAAAG ATCATCATCG CAGGCGCCGG TGGCGCAGCA CACCTTCCTG GTATGGTGGC CGCTATTACT ACATTGCCTG TAATTGGTGT TCCTATTAAA TCTTCCAACT CCCTTGATGG TTGGGATTCC CTGTTGTCCA TCGTACAAAT GCCTGGCGAC ATACCTGTAG CCACAGTAGG TGTTAATGGC GCCCGTAATG CCGGTCTGCT GGCAGTACAG ATGCTGGGTA TCAGCAACAG CTCCATCAGA CAACAGCTGG CAGCTATGAA AAAAGAAAAT AATGAGAAGG TGGCTAAACA GAATGAAACC TTAGAGCAAT TCTAA
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Protein sequence | MKQVEVGIIM GSSSDAPTMR QAIEVLKKFD IGYEFSVVSA HRSPQRMFDY AATAEERGLK IIIAGAGGAA HLPGMVAAIT TLPVIGVPIK SSNSLDGWDS LLSIVQMPGD IPVATVGVNG ARNAGLLAVQ MLGISNSSIR QQLAAMKKEN NEKVAKQNET LEQF
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