Gene Cpin_5705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5705 
Symbol 
ID8361885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7271666 
End bp7272160 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content47% 
IMG OID644967847 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_003125328 
Protein GI256424675 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG TAGAAGTAGG CATTATTATG GGCAGCAGTT CTGATGCGCC TACCATGCGT 
CAGGCAATAG AGGTGTTAAA GAAATTCGAC ATAGGCTATG AATTTAGCGT TGTGTCAGCA
CACCGTAGCC CCCAAAGAAT GTTTGACTAT GCAGCTACCG CTGAAGAGCG TGGTTTAAAG
ATCATCATCG CAGGCGCCGG TGGCGCAGCA CACCTTCCTG GTATGGTGGC CGCTATTACT
ACATTGCCTG TAATTGGTGT TCCTATTAAA TCTTCCAACT CCCTTGATGG TTGGGATTCC
CTGTTGTCCA TCGTACAAAT GCCTGGCGAC ATACCTGTAG CCACAGTAGG TGTTAATGGC
GCCCGTAATG CCGGTCTGCT GGCAGTACAG ATGCTGGGTA TCAGCAACAG CTCCATCAGA
CAACAGCTGG CAGCTATGAA AAAAGAAAAT AATGAGAAGG TGGCTAAACA GAATGAAACC
TTAGAGCAAT TCTAA
 
Protein sequence
MKQVEVGIIM GSSSDAPTMR QAIEVLKKFD IGYEFSVVSA HRSPQRMFDY AATAEERGLK 
IIIAGAGGAA HLPGMVAAIT TLPVIGVPIK SSNSLDGWDS LLSIVQMPGD IPVATVGVNG
ARNAGLLAVQ MLGISNSSIR QQLAAMKKEN NEKVAKQNET LEQF