| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5699 |
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| Symbol | |
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| ID | 8361879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7267017 |
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| End bp | 7267814 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644967842 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003125323 |
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| Protein GI | 256424670 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.542454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACA AATTAGCGGG CAAGCGCGCA CTGGTAACAG GATCCAGCGC CGGCCTCGGG
GAAGCTATTG CCATTATGCT GGCAGATGAA GGCGTACACG TGATCGTACA TGGACGTAAT
GAGGAAAGAA CAAAGGCCGT CGCACAACGG ATTACCGAAG CCGGTGGTAC CGTGGAAGTC
GCTTTGGGCG ACCTTGCAAC GGACGAAGGA GCCGATAATG TCGCCAAGGT GGCATTGGCT
GGTGGCCCCA TAGACATCCT GGTCAACAAC GCCGGATATT ATGCACACAC CTCCTGGTCA
AATACCTCCT GCCAGGATTG GACGGATGTT TATAACGTGA ACGTGATCTC TTATGTCCGC
ATGATTCAGC GTATCTTACC TGCAATGAAA GGTCAGGGCT GGGGAAGGGT TATCAATATT
GGCGGCGGAT TAGGTATACA ACCCATCAGC GATCAGCCTC ACTATAACGC CAGCCTCGCC
GCACGTCATA ATATGAGTGT CTCCCTCGCT AGACAACTCG CAGGTACCGG CATTACCTCC
AATGTAGTAG CGCCGGGCGC CATTATGAAT CCCGGCGTAG AGCAGTGGCT GCGCAATGCC
GCACCACAAA AAGGATGGGG GACCGATATT GCCGAAATGG AACGTAATGC AGTAAAAGAG
CTGGTGCCCA ATGATGCCGG CAGATTTGGA AGACAGGAAG AAGTAGCTGC TGCTGTAGCT
TATCTGGCCA GCCCTTACGC CGACTATGTC AGCGGCGCAC TGCTGCGTGT CGATGCCGGC
ACCGTTCGCA GTATCTAA
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| Protein sequence | MDYKLAGKRA LVTGSSAGLG EAIAIMLADE GVHVIVHGRN EERTKAVAQR ITEAGGTVEV
ALGDLATDEG ADNVAKVALA GGPIDILVNN AGYYAHTSWS NTSCQDWTDV YNVNVISYVR
MIQRILPAMK GQGWGRVINI GGGLGIQPIS DQPHYNASLA ARHNMSVSLA RQLAGTGITS
NVVAPGAIMN PGVEQWLRNA APQKGWGTDI AEMERNAVKE LVPNDAGRFG RQEEVAAAVA
YLASPYADYV SGALLRVDAG TVRSI
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