Gene Cpin_5695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5695 
Symbol 
ID8361875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7263684 
End bp7264715 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content53% 
IMG OID644967838 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003125319 
Protein GI256424666 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.574303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATA ATGTAACCAA AAGCACTGGT ACAATGAAGG CTGTCAGGAT CCACGAATTC 
GGCGGACCAG CAGTATTACG CTATGAAGAT GCACCGCTGC CGGTATTGAA GGCAGGAGAA
TTGCTCGTAC GTGTGTACGC CGTAGGTATT AATCCGCCGG ACTGGTACCT GCGCGAGGGA
TATAAATCGC TCCCGCCGGA ATGGCGTCCA TCGATGCCTA TGCCTGTTAT CCCAGGTACA
GATATATCGG GTGTCGTTGA AGCCATTGCA CCGGATGTAA AAGGCTTCTC CGTAGGAGAT
GAAGTATTTA GCATGGTCCG CTTTCCCAGC TTCGGAGACA GCGCCGCCTA TGCGGAGTAT
GTCGCTGCGC CCGCACAGGA TTTCGCACAC AAACCGGCTG GCATAGATCA CGTACAGGCA
GCAGCTGCGC CGATGGCAGC CCTTACCGCA TGGCAGTTCC TCATAGAACT GGGCCATGAT
GTACAGAACC CGCTTCAGCC GGAAACGCAT CGTCCTGTAC CGCTGGAGGG TAAAACCGTC
CTCGTAAATG GCGCTGCTGG TGGTGTGGGG CACTTTGCCG TGCAACTCGC TAAATGGAAA
GGCGCACACG TGATCGCAGT AGCCTCAGGT AAGCATGAAA CATTCCTCCG TGCACTCGGT
GCAGACGAAT TCATCGACTA TACACAACAG GCGCCGGAAG ACGTTGCAAA GGATATCGAT
CTAGTTATTG ATACACTGGG TGGTCCGACT ACTGGTCGCT TCCTGCACAC CCTCAAACGT
GGCGGCGCAT TGTTCCCGGT ATTCTTAGGC TTCTCTGATG GAGAAGAGGC TGTGAAGAAA
GGTATCACAG TCTCCATGAC ACAGGTACGC TCTAATGGTC CGCAACTGGA AACAATCGGA
CGTCTGCTGG ATGACAAGAC CATTCGCGTG GCTATCGATA GCACCTTCTC ACTCGCCGAT
GCACAGAAAG CACATGAACG GGCAGCGCAT GGTCACATCC AGGGCAAGAT TGTTCTCACG
GTTGATAAAT AA
 
Protein sequence
MENNVTKSTG TMKAVRIHEF GGPAVLRYED APLPVLKAGE LLVRVYAVGI NPPDWYLREG 
YKSLPPEWRP SMPMPVIPGT DISGVVEAIA PDVKGFSVGD EVFSMVRFPS FGDSAAYAEY
VAAPAQDFAH KPAGIDHVQA AAAPMAALTA WQFLIELGHD VQNPLQPETH RPVPLEGKTV
LVNGAAGGVG HFAVQLAKWK GAHVIAVASG KHETFLRALG ADEFIDYTQQ APEDVAKDID
LVIDTLGGPT TGRFLHTLKR GGALFPVFLG FSDGEEAVKK GITVSMTQVR SNGPQLETIG
RLLDDKTIRV AIDSTFSLAD AQKAHERAAH GHIQGKIVLT VDK