Gene Cpin_5692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5692 
Symbol 
ID8361872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7261516 
End bp7262472 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content43% 
IMG OID644967835 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003125316 
Protein GI256424663 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGATA TTCAACAGCA ATCTGAACCG GTTATTCTCA GGAAACTGGC TCATTTATTA 
GGGACGGAGG TGAAAAACAA CCGACTGGAC ATTCCTGCGG AATATGGCAG TGGTTATTGT
AGTGGTTTTG TGTTTAATGC GCATATCAGG ATGTTTGTCT TTCATTATGA GCTGAATGAA
AATGTGGTGG TGGACAATGA GGGTAAGGAT GCCGTTCCCA TGCTTCTTTT TAAATTTCAG
CACATTATTC CTGATATAGG GTTATCGCCA GCAGAAAAGC AGCAGGTAAT GCCTTCTGTG
CTGATAACGA CGAGTAGTCT GCATACCGAT ACAGCGGTTC CTATTCATAG TAATAAAGCG
ACGATCAATA TTGAAGTAGA CCCTAATTAT CTCAGGGGAC TTTTTGATAA TTCGGTGCAA
TCGCCTGTTT TACAAAGTTT GTTACAGAAC ACACAGCCCT TGTTATTTGA GCAGATGGTA
CAACCTTCTT TACAGAAGAT TGTGGACGAG ATGTTAGCTG CGGGTGTGGA GGATACTTTT
AAATTGTTTT TCCTGCGGAT AAAGGCAGAG GAACTGATCT GCAGACTACT GATGGAGTTA
GAGAAACGGG ATGAACAACA GTTGTATGCT TTAAATGGCC GTGATGTAGC CATGATGTAC
AAAGTGAAGG AACAGTTATT GGCGCAGCTG GATACACCGC CGGTTATTAA GGAGCTGGCA
CTTAGTGCAG GAATGAGTCC GACGAAACTG AAGCGTTTAT TTAAACAGAT ATTCGGCGAT
AGCATTTTCT CGTATTACCA GGCATTCAGG ATGCGGGAGG CGGCTATTTT ATTGAAGGAT
GAAAAGTTGT CTGTTTCGGA TGTGGGGTAT CAATTAGGCT TTACGAATCT TAGTCACTTC
TCAAGGGTTT TCCAGGAGCA TATGGGTATG AAGCCGAAGC AATATAGCAG GTCATGA
 
Protein sequence
MRDIQQQSEP VILRKLAHLL GTEVKNNRLD IPAEYGSGYC SGFVFNAHIR MFVFHYELNE 
NVVVDNEGKD AVPMLLFKFQ HIIPDIGLSP AEKQQVMPSV LITTSSLHTD TAVPIHSNKA
TINIEVDPNY LRGLFDNSVQ SPVLQSLLQN TQPLLFEQMV QPSLQKIVDE MLAAGVEDTF
KLFFLRIKAE ELICRLLMEL EKRDEQQLYA LNGRDVAMMY KVKEQLLAQL DTPPVIKELA
LSAGMSPTKL KRLFKQIFGD SIFSYYQAFR MREAAILLKD EKLSVSDVGY QLGFTNLSHF
SRVFQEHMGM KPKQYSRS