Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5692 |
Symbol | |
ID | 8361872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7261516 |
End bp | 7262472 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644967835 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003125316 |
Protein GI | 256424663 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGATA TTCAACAGCA ATCTGAACCG GTTATTCTCA GGAAACTGGC TCATTTATTA GGGACGGAGG TGAAAAACAA CCGACTGGAC ATTCCTGCGG AATATGGCAG TGGTTATTGT AGTGGTTTTG TGTTTAATGC GCATATCAGG ATGTTTGTCT TTCATTATGA GCTGAATGAA AATGTGGTGG TGGACAATGA GGGTAAGGAT GCCGTTCCCA TGCTTCTTTT TAAATTTCAG CACATTATTC CTGATATAGG GTTATCGCCA GCAGAAAAGC AGCAGGTAAT GCCTTCTGTG CTGATAACGA CGAGTAGTCT GCATACCGAT ACAGCGGTTC CTATTCATAG TAATAAAGCG ACGATCAATA TTGAAGTAGA CCCTAATTAT CTCAGGGGAC TTTTTGATAA TTCGGTGCAA TCGCCTGTTT TACAAAGTTT GTTACAGAAC ACACAGCCCT TGTTATTTGA GCAGATGGTA CAACCTTCTT TACAGAAGAT TGTGGACGAG ATGTTAGCTG CGGGTGTGGA GGATACTTTT AAATTGTTTT TCCTGCGGAT AAAGGCAGAG GAACTGATCT GCAGACTACT GATGGAGTTA GAGAAACGGG ATGAACAACA GTTGTATGCT TTAAATGGCC GTGATGTAGC CATGATGTAC AAAGTGAAGG AACAGTTATT GGCGCAGCTG GATACACCGC CGGTTATTAA GGAGCTGGCA CTTAGTGCAG GAATGAGTCC GACGAAACTG AAGCGTTTAT TTAAACAGAT ATTCGGCGAT AGCATTTTCT CGTATTACCA GGCATTCAGG ATGCGGGAGG CGGCTATTTT ATTGAAGGAT GAAAAGTTGT CTGTTTCGGA TGTGGGGTAT CAATTAGGCT TTACGAATCT TAGTCACTTC TCAAGGGTTT TCCAGGAGCA TATGGGTATG AAGCCGAAGC AATATAGCAG GTCATGA
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Protein sequence | MRDIQQQSEP VILRKLAHLL GTEVKNNRLD IPAEYGSGYC SGFVFNAHIR MFVFHYELNE NVVVDNEGKD AVPMLLFKFQ HIIPDIGLSP AEKQQVMPSV LITTSSLHTD TAVPIHSNKA TINIEVDPNY LRGLFDNSVQ SPVLQSLLQN TQPLLFEQMV QPSLQKIVDE MLAAGVEDTF KLFFLRIKAE ELICRLLMEL EKRDEQQLYA LNGRDVAMMY KVKEQLLAQL DTPPVIKELA LSAGMSPTKL KRLFKQIFGD SIFSYYQAFR MREAAILLKD EKLSVSDVGY QLGFTNLSHF SRVFQEHMGM KPKQYSRS
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