| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5675 |
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| Symbol | |
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| ID | 8361855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7235819 |
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| End bp | 7238188 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967818 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003125299 |
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| Protein GI | 256424646 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.279033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAAGA ACTATCTGAA AATCGCTTTT AGGAACATTA CACGTCACAA AGCGTATAAT
GCCATCAATA TATCCGGCCT CGCTGTAGGG ATGGCCGCCA GTATTCTGAT CCTTTTATGG
GTACAGCATG AACGCAGTTA TGACCGCTTC CATAAAAACG CCGGACAAAT CTATCGTATC
GTCGTAGATG CCAGTGGTTA CAAAGCGGCC GTGAATTGTG CGGGTATGCC AGCCGGATTA
CAGGCCGAAA TGCCCCAGGT GAAGAATTAT GTGCGCCTGA GTCACCAGGA TACACATCTC
TTTGAAGCCG GTGACAATAA GTTTGAAGAA AAAAGGATTT TCTATGCAGA TCCCGCTTTC
CTGGAAGTAT TTTCCTTCCC GCTATTAAAA GGAGATCCGA AAAGCGCCTT ACAGCGTATC
GACGGCGTGC TGCTCACAGA GAATATGGCA AAAAAGTATT TCGGTGAAAA GGAGGCCGTC
GGACAAACCC TGAAACAAGA CAATGGTAAG ACCCTGACGG TTACCGGCGT ACTGGCAAAT
GTGCCTGCCA ATTCTCACCT GCAATTCGAT TTTATCCTGC CGATCGCTGC CAATACCGGC
AATGCGGAAG ACCTGAAAAC GAATACCTGG AGGAACTTCA ATTTCTATAG CTACATACAA
CTGGATAAAA GCTTCGTGCC GACTGAAGCC GCATTGGCAA AGTTCAACAA GCAGATGAAC
GAAATCTTCC GTCAACATGC CGTAATGGGT ATGAAAGCAG AATTTCGGCT GCAACCCATC
ACAGACATTC ACCTGCATTC CAACTTCCAG GTTGACCTGC CTGGACACGG TAACATCCAG
TACGTGCATA TATTTTTCAT CGTAGCCATC GTCATCCTGA TTGTAGCCTG TATCAATTTT
ATGAACCTGG CTACCGCCAG ATCTGCCCGC AGGGCAAAAG AAGTAGGATT AAGAAAAGCC
ATTGGCGCAG TCAGGGTACA ACTGATCCGT CAGTTCATGG CAGAGTCGCT GCTGATCTCC
TTCTTCTCTT TAATGGTGGC CATTGTGATG GTATGGTGTA CCCTACCGCT ATTCAATTTC
CTGGCTGAAA AGAATTTATC ATTACAACTC CTGGATATTA AACTGGTATT GACGCTGTTA
GGAATCGCCC TTGCTACCGG GGTAGTATCA GGCAGTTATC CCGCATTGTT CCTGTCCGGT
TTCCAGCCGG TAAAAGTGCT GAAAGGTAAC CTGACTTCCT CCGGAGGGAA TCTGTTCTTC
CGCAACGGAT TGGTAGTAAC ACAGTTTGTT GTTTCCATTG TACTGCTGAT AGGGACTGTT
GTCGTGTACC AGCAGCTGCA ATACATCAAA AGCAGGAATA TGGGTTTTGA GAAAGAAAAC
CTCTTATACA TGCCTATGAA TGGTGCTGTG GCCGGCAGAT CGGAATTACT TGGTTCCGCA
TTAAAACAAA ATGCACTTAC AGCCGATTAT ACCATTACTT CGGAATTACC CATTAACCTT
ACGACCGGTT CCCTGAATGT ACAATGGGAG GGAAGGGATC CGGAGTCGCA GGTCGTGATT
CCTTCTATGG ATGTAGACGA ACACTTCTTT GACGTTTTTC ATATGCAGAT CCTGAACGGT
AGAGGATTCT CGACTGCCTA CCGGGCAGAT TCCAGCAGCT TCGTGGTCAA TGAGAAAGCA
GTGCAGGTCA TGGGTATGAC GGTGGACAAT GCAGTTGGAA AGTCCCTGTA TTTTGATGGT
GTGAAAGGAA TGATCATCGG GGTAGTGAAG GACTTTAACT TTAAACCCAT CCAGCAAAGT
ATTGAACCCC TGGTACTGTG CCCGAACAGA TGGGGCGGTT TTGCCGTGAT CAGGGCAAAG
AGCGGTACTA CAGAAGCAAC GATAAAAGCA TTGGAGAAGA TCAGCCGTGA ACTCAATCCT
GCTTATCCCT TTACTTACAA TTTCCTGGAT CAGGACCTGG CGAATCTCTA TCAGGGAGAA
CAGCAGATGG GAAATATCTT CAACTTATTT GCCGTACTGG CAGTATTTAT CTCCTGTCTG
GGACTGTATG GATTATCCGC TTTCCTGGCA CAGCAACGGG CCCGGGAAAT TGGTATCAGG
AAAGTAATGG GTGCTTCTGC CTCCAACATC GTTTACCTGC TGTCAACCGG TTTCACCCGG
CTGATACTGA TCGCTATCGT GATTGCTATA CCGCTTGCTT TACTGGCCAT TGACCGCTGG
CTGGAGAATT TTGCCTATCA CATCGAGGTG AACTGGCTGA TATTCATTTT AGGGCCATTA
GCTGCGCTGA TGATTGCCTG GCTGACTGTT AGCTATGAGT CTTTGAAAGC GGCGTTTACG
AACCCTATAA AGAGCCTTAA AGCGGAATAA
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| Protein sequence | MLKNYLKIAF RNITRHKAYN AINISGLAVG MAASILILLW VQHERSYDRF HKNAGQIYRI
VVDASGYKAA VNCAGMPAGL QAEMPQVKNY VRLSHQDTHL FEAGDNKFEE KRIFYADPAF
LEVFSFPLLK GDPKSALQRI DGVLLTENMA KKYFGEKEAV GQTLKQDNGK TLTVTGVLAN
VPANSHLQFD FILPIAANTG NAEDLKTNTW RNFNFYSYIQ LDKSFVPTEA ALAKFNKQMN
EIFRQHAVMG MKAEFRLQPI TDIHLHSNFQ VDLPGHGNIQ YVHIFFIVAI VILIVACINF
MNLATARSAR RAKEVGLRKA IGAVRVQLIR QFMAESLLIS FFSLMVAIVM VWCTLPLFNF
LAEKNLSLQL LDIKLVLTLL GIALATGVVS GSYPALFLSG FQPVKVLKGN LTSSGGNLFF
RNGLVVTQFV VSIVLLIGTV VVYQQLQYIK SRNMGFEKEN LLYMPMNGAV AGRSELLGSA
LKQNALTADY TITSELPINL TTGSLNVQWE GRDPESQVVI PSMDVDEHFF DVFHMQILNG
RGFSTAYRAD SSSFVVNEKA VQVMGMTVDN AVGKSLYFDG VKGMIIGVVK DFNFKPIQQS
IEPLVLCPNR WGGFAVIRAK SGTTEATIKA LEKISRELNP AYPFTYNFLD QDLANLYQGE
QQMGNIFNLF AVLAVFISCL GLYGLSAFLA QQRAREIGIR KVMGASASNI VYLLSTGFTR
LILIAIVIAI PLALLAIDRW LENFAYHIEV NWLIFILGPL AALMIAWLTV SYESLKAAFT
NPIKSLKAE
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