| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5670 |
|---|
| Symbol | |
|---|
| ID | 8361850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7230966 |
|---|
| End bp | 7231637 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644967813 |
|---|
| Product | YceI family protein |
|---|
| Protein accession | YP_003125294 |
|---|
| Protein GI | 256424641 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2353] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.575338 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAA CAGTACCTGC TTTTATCCTG CTGCTGACAC TGGCAGCTTG TGGTGGAGCC
TCCAGCGATC AGGCAAAAAC CGAGGAAAAG AAAGAAGCAG CTGCGACCAC CGGCGTAGCT
TATGCGATTG ACACAACAGC AACTTCTGTT CAATGGCGCG CTACTCACAA AGGTGGATTT
GCACCACGCT TTGGCACTAT TAAAGTTGTT GACGGTACCC TGAACGTAGA AAACGGCACT
ATCAGCAGTG GTAATTTCGA CGTAAACCTG AACTCCCTGA CAACTGACCC TGCGTCTGTT
ACAGAGAAAG ACAAAAAGTC AACTGACCTG GATGGCCATC TGAAGAGCCC GGATTTCTTC
GATGCAGCTA ACCATCCGAT GGCTAAATTC GTTATCACCA GTGTTACTGC GTACGACAGC
ACCAAAGAAA AAAGCCTGCT GCCTGGCGCG ACTAACCTGA TCAGCGGTAA CCTGACCCTG
AAAGACAGCA CCCTGAACAT CACTTTCCCT GCACAGATCG TTGTAGGCGA AAATGACGTT
ACTGCTAACG CGAAATTCGT GATAGACAGA ACTGCATGGG GTATCAACTA CAAAACTGAA
GGTAGTCCTG AAAACTGGGC GATCAGCAAA GATGTAGAAA TTGGTTTCAC GCTGAAAGCG
GCGAAGAAAT AG
|
|---|
| Protein sequence | MKQTVPAFIL LLTLAACGGA SSDQAKTEEK KEAAATTGVA YAIDTTATSV QWRATHKGGF
APRFGTIKVV DGTLNVENGT ISSGNFDVNL NSLTTDPASV TEKDKKSTDL DGHLKSPDFF
DAANHPMAKF VITSVTAYDS TKEKSLLPGA TNLISGNLTL KDSTLNITFP AQIVVGENDV
TANAKFVIDR TAWGINYKTE GSPENWAISK DVEIGFTLKA AKK
|
|---|
| |