Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5667 |
Symbol | |
ID | 8361847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7227987 |
End bp | 7228952 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644967810 |
Product | beta-lactamase domain protein |
Protein accession | YP_003125291 |
Protein GI | 256424638 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.105538 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAAT TAGGATCGTT ATTGTATGCC TGCCTGTTAC TGAGCATCCC TTTTTCCGGG GTGACGGCGC AGGACAAGGC CAGCCATAAA TTAGCACAAC CAGGGTATTA CCGGATGAAA CTCGGCGACC TGGAGATCAC CGCCCTTTCA GACGGTACCG TTCCCCTGGC AGCAGATCAG TTACTGATGA ATACCAGGCC CGGACAGATC GACTCCCTCT TACAATACAA TTTTCAGGCG CTTCCCCTGG AAGCATCTGT CAATGCTTAT ATCATCAATA CAGGAAAGGA ACTGATCATG GTAGACGCGG GTACGGCTGA GTTATACGGA CCTACACTGG GACATCTGCC GGAAAGTATC CGGGCAGCAG GATATAAACC CGAGGATATC CGTAAGATCC TGATCACCCA TATCCATACT GATCATACAG GTGGTTTGAT GGAAGGAAAT AGGATGGTAT TCCCTAATGC AACCGTTTAT ATCAGTCGCC CGGAAGTGGA CTTCTGGTTC AGCGATGAAC AGATGCAGAA AGCGCCCGCT GATAAAAAGA AATATTTTAT CGAAGGACGT ACAAAAGTCG GCCCCTATCT GAAGGCCGGT AAAGTGAAAA TGTTTGACTA TGGCGGCGAA CTATTACCCG GCATCACCCC GGTTGCTACA CCAGGACATA CGCCAGGACA TACTTTTTAT GCCGTGGAAA GCAAAGGAGA GAAAATCCTT TTCTGGGGAG ATATCATGCA CGTCGCACCG GTACAGTTTG CAGACCCTGC TGTCACCATC CGCTTTGACA TCGATCCGGC AGCAGCTGCG GCTGCCAGGA TAAAAGCCTT CAAAGAAGCG GCACAAGGCA AATACTGGAT CGCGGTCGAT CATATTTCTT TCCCTGGTAT CGGACACCTG AGACAGAAAG AAACCGGTTT TGAATGGATC CCCGTAAACT ACAGCACTTA TGGCAGCGGA CAATAA
|
Protein sequence | MKKLGSLLYA CLLLSIPFSG VTAQDKASHK LAQPGYYRMK LGDLEITALS DGTVPLAADQ LLMNTRPGQI DSLLQYNFQA LPLEASVNAY IINTGKELIM VDAGTAELYG PTLGHLPESI RAAGYKPEDI RKILITHIHT DHTGGLMEGN RMVFPNATVY ISRPEVDFWF SDEQMQKAPA DKKKYFIEGR TKVGPYLKAG KVKMFDYGGE LLPGITPVAT PGHTPGHTFY AVESKGEKIL FWGDIMHVAP VQFADPAVTI RFDIDPAAAA AARIKAFKEA AQGKYWIAVD HISFPGIGHL RQKETGFEWI PVNYSTYGSG Q
|
| |