Gene Cpin_5667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5667 
Symbol 
ID8361847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7227987 
End bp7228952 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID644967810 
Productbeta-lactamase domain protein 
Protein accessionYP_003125291 
Protein GI256424638 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.105538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAT TAGGATCGTT ATTGTATGCC TGCCTGTTAC TGAGCATCCC TTTTTCCGGG 
GTGACGGCGC AGGACAAGGC CAGCCATAAA TTAGCACAAC CAGGGTATTA CCGGATGAAA
CTCGGCGACC TGGAGATCAC CGCCCTTTCA GACGGTACCG TTCCCCTGGC AGCAGATCAG
TTACTGATGA ATACCAGGCC CGGACAGATC GACTCCCTCT TACAATACAA TTTTCAGGCG
CTTCCCCTGG AAGCATCTGT CAATGCTTAT ATCATCAATA CAGGAAAGGA ACTGATCATG
GTAGACGCGG GTACGGCTGA GTTATACGGA CCTACACTGG GACATCTGCC GGAAAGTATC
CGGGCAGCAG GATATAAACC CGAGGATATC CGTAAGATCC TGATCACCCA TATCCATACT
GATCATACAG GTGGTTTGAT GGAAGGAAAT AGGATGGTAT TCCCTAATGC AACCGTTTAT
ATCAGTCGCC CGGAAGTGGA CTTCTGGTTC AGCGATGAAC AGATGCAGAA AGCGCCCGCT
GATAAAAAGA AATATTTTAT CGAAGGACGT ACAAAAGTCG GCCCCTATCT GAAGGCCGGT
AAAGTGAAAA TGTTTGACTA TGGCGGCGAA CTATTACCCG GCATCACCCC GGTTGCTACA
CCAGGACATA CGCCAGGACA TACTTTTTAT GCCGTGGAAA GCAAAGGAGA GAAAATCCTT
TTCTGGGGAG ATATCATGCA CGTCGCACCG GTACAGTTTG CAGACCCTGC TGTCACCATC
CGCTTTGACA TCGATCCGGC AGCAGCTGCG GCTGCCAGGA TAAAAGCCTT CAAAGAAGCG
GCACAAGGCA AATACTGGAT CGCGGTCGAT CATATTTCTT TCCCTGGTAT CGGACACCTG
AGACAGAAAG AAACCGGTTT TGAATGGATC CCCGTAAACT ACAGCACTTA TGGCAGCGGA
CAATAA
 
Protein sequence
MKKLGSLLYA CLLLSIPFSG VTAQDKASHK LAQPGYYRMK LGDLEITALS DGTVPLAADQ 
LLMNTRPGQI DSLLQYNFQA LPLEASVNAY IINTGKELIM VDAGTAELYG PTLGHLPESI
RAAGYKPEDI RKILITHIHT DHTGGLMEGN RMVFPNATVY ISRPEVDFWF SDEQMQKAPA
DKKKYFIEGR TKVGPYLKAG KVKMFDYGGE LLPGITPVAT PGHTPGHTFY AVESKGEKIL
FWGDIMHVAP VQFADPAVTI RFDIDPAAAA AARIKAFKEA AQGKYWIAVD HISFPGIGHL
RQKETGFEWI PVNYSTYGSG Q