Gene Cpin_5659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5659 
Symbol 
ID8361839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7216999 
End bp7217730 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content38% 
IMG OID644967803 
Productmetal dependent phosphohydrolase 
Protein accessionYP_003125284 
Protein GI256424631 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.489267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATC CAAAGAATTC TATAAAAAAC GATATAGATA ATATCTTCTG GTCTTCGAAC 
CTATCTAATA TATATAGATT CACCAAACAA CGTTTTTGGG AAAGGGAAAC AGAAAATCAT
GAAAAATCGA TAGCCATAGA CGGCCTAAAT TCAGTGGGAA CTACGTGTAG GCGAACTGAA
AGCGTCAGCG AACATTCCTG GCATTTGGCG GATATTTGTC TGATCTTAGC TCCGAAATAT
CCAAAACTGG ATTTGCAGCT CTGTGTAACA TTGGCAATTC TTCATGACAA ACTAGAAATT
ATAACAGGGG ATTTTGACCC GTTAGGACGC TATGGAGATG GCTTAGATAC TCATGCTTTT
GATCCAATAA AGAGGCAACA AAAGGCCAAT GCAGAAGAAA ATGCCTTGCT AGAATATCTA
TCGATGTTGA GCATTCCTGA AAGATCTTAT CACGAATTAC TATTCAGGCA GATCTTAGAC
CTGAGTACGT CCGAGGCTCT TTTTTTGAAG GCACTTGATA AAATTCATCC GTTGATCTAT
GTCATTCAGA AGAAAAACGG AGCTATGGAA GACGCCCACA TACATTTTAC CCTAAGATAC
TCCGGGCAAT TCAAACAATA TTTCCCTGAA TTAGAACCTT ACTACAGGGA ACTTTCACGA
AGGTTGATAG AAAGTGTAAG TTCCTATAGA AATGTGGATA TTCAAATATT AAAACATCTT
CTGCATGAAT AG
 
Protein sequence
MENPKNSIKN DIDNIFWSSN LSNIYRFTKQ RFWERETENH EKSIAIDGLN SVGTTCRRTE 
SVSEHSWHLA DICLILAPKY PKLDLQLCVT LAILHDKLEI ITGDFDPLGR YGDGLDTHAF
DPIKRQQKAN AEENALLEYL SMLSIPERSY HELLFRQILD LSTSEALFLK ALDKIHPLIY
VIQKKNGAME DAHIHFTLRY SGQFKQYFPE LEPYYRELSR RLIESVSSYR NVDIQILKHL
LHE