| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5647 |
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| Symbol | |
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| ID | 8361824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7202499 |
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| End bp | 7204061 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967788 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003125272 |
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| Protein GI | 256424619 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.688927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGCA CTATAAAATG GACGCTGGCT GCAGGTATTG CAATGTTTTC AGCTTCCTGC
AGCAATTTCC TCGATGAAAA GAGTCTGACC AGACTGGATG AAGGCCAGGT ATACTCTGAC
GTAAATCTCG TTGAAACAAG TCTTAAAGGT ATTTACGCTA ACTGGAAGGG TATCCGTACA
GATGAGCAGG GGCTCATCCC GATGATGGGT ACCGATGAAA CACAGCAGGG CGCTTTACAG
ATGAAAAGTG ATGCGAGCAA AGGTGGCCTG GATCGTTTTG ACGGTAACCT GAACTCTTCA
CAGGGACATA TCACTAATCA GTGGAACATC CGCTGGCCAA TGGTGACTGA GGCGGCTAAA
ATTGTAAAAG GTCTTGGCGC CAATCCGGTA GAATCAGGTT CCCGCGAGGC TAAATTACTG
GGTGAAGCTT CTTTTATACG TGGCTTCCTC GATTTTCAAC TGGCGATGTA CTGGGGTGAA
ATTCCTATCT CTGATCCTGA CCGTGCCAGT GAAATCGGTG GTCACCGTCA GCCGTTAAAA
GATGTATGGG CATTTATCAT TGCTGATTTG CAACGTGCGG CGGACAACTG TCCTAAGACC
AACGATCCGG GACGTGCTAC TTCCGGTGCT GCCTGGATGA TGCTGGGTAA GGCGTATATG
TCGGCGCCGG TAAGTACTGG TCTGCGCGAC TTCGCCAAAG CGGCTGCCTG CTTTGAAAAG
ATGATGGGTG ATTATTCCCT GGTCCCTTAC AAGAACCTGT TTGATTATGC TACGCCAAAC
ACGGCTGAGG CAGTACTGGA ATTCCAGTTT AGTCCGGTGT ATCCAAACAA CAATAAAATA
CAGTTCCAGA TTGGTTCCCG TGCAGTACAG GCTTTCTTTG GCGATGGTTG CTACTACTCT
GGTTATGATA AACTGGTGCC TACCCATTAC GCTTACTCTT CTGTAGATAG CGGTGGTGTA
TGGGAACCTG GTGATCAGCG TCGTTTTGAA GCGATCCGTT ACGATTTCAC TTATTATGGT
GAAGTGCCGA ATCTGGATCC GCTTAAATGG GAAGACCTGG GTAATGACTA TGATGAATTG
CTGCCACACG TGAAAAAATA TGAAGACTTC CGTACTGATA AGCATACCGA AAACAAGATT
AATAACATGT GGAACTCCGG TAAAAATATT CCGGTGCTTC GCCTGGCGGA TGCTAAATTA
AGCTATGCAG AATGTCTGAA TGAGCTGAAC CGTGGTGCAG AAGCTATTAT TGTAGTGAAT
GAAGTAAGAG CACGTGCATG GGGCGGCGTA CTGCCGGAGG ACAAAAAATG GAAAGCTATG
TCACAGGATG CGTTCCGTAC CGCTATCCTG GACGAGCGTA TGCGCGAGCT TTTCGCAGAA
GACTGGCGCC GTATTGACCT GATCCGTACA GGCAAATACG TGGAATTAGT AAAAGCACGT
AACAAATGGA CCAAACAATC TGGTACCATA CAGGAATTCA ACACTTTATT CCCGATTCCG
GATACGGAAA TGAAACTGAA CCCGGATATT ACTCCGGCAG ATCAGAATCC AGGTTATCGT
TAA
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| Protein sequence | MKSTIKWTLA AGIAMFSASC SNFLDEKSLT RLDEGQVYSD VNLVETSLKG IYANWKGIRT
DEQGLIPMMG TDETQQGALQ MKSDASKGGL DRFDGNLNSS QGHITNQWNI RWPMVTEAAK
IVKGLGANPV ESGSREAKLL GEASFIRGFL DFQLAMYWGE IPISDPDRAS EIGGHRQPLK
DVWAFIIADL QRAADNCPKT NDPGRATSGA AWMMLGKAYM SAPVSTGLRD FAKAAACFEK
MMGDYSLVPY KNLFDYATPN TAEAVLEFQF SPVYPNNNKI QFQIGSRAVQ AFFGDGCYYS
GYDKLVPTHY AYSSVDSGGV WEPGDQRRFE AIRYDFTYYG EVPNLDPLKW EDLGNDYDEL
LPHVKKYEDF RTDKHTENKI NNMWNSGKNI PVLRLADAKL SYAECLNELN RGAEAIIVVN
EVRARAWGGV LPEDKKWKAM SQDAFRTAIL DERMRELFAE DWRRIDLIRT GKYVELVKAR
NKWTKQSGTI QEFNTLFPIP DTEMKLNPDI TPADQNPGYR
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