| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5645 |
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| Symbol | |
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| ID | 8361822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7198235 |
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| End bp | 7200415 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967786 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_003125270 |
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| Protein GI | 256424617 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAA AGATATTATC CATTTTGTTT TTCCTGGTTG TTATAACCCT TTCCGCACAT
GCGGAGACGA TCCACATTGC CACTAAAGAG ACAGAACTGG TATTACAGAC CGCACAAAAC
GGACGGCTGT TTCAATTGTA TCTCGGCCCC CGTCTGGCCG TTGCGGATGA CTACAATCAT
CTGACCGCCA ATATGAAGGG AAAGAGCGAT GGACAGGCAT GGGAAGCCTA TCCTGTATCC
GGCACAGAAA CCTATTTCGA ACCTGCGTTC GGTATCCGTC ATAATGATGG TAACCAGGCT
ACCGTGCTGA AATATGTTTC TCATACTACA AAGAAAGTTT CTGACGATGT GACCGAAACG
GTTATTACAC TGAAAGACGA TCTGTATCCT GTACAGGTGA AACTCTTCTA TCGCACATTT
GCAAAGGATA ATATCATTGA ATCCTGGACT GAGATCAGCC ACAACGAAAA GAAAGCAGTC
AGCATCAATA ACTATGCTTC TTCCATGTTA TACTGGAAAC GCAGTCAGTA CTTCCTGACT
GAATTCAGCG GAGACTGGGC GAAAGAAGTA AATATGACCA CTACACCGCT GGCTTTCGGT
AAAAAAATGG TTGATTCCAA ACTGGGTTCC AGGGCAAACC TGCACGTATC TCCGTTCTTT
ACGGTAGGTC TGGGGGATAC TCCGCGTGAA AACGACGGAC AGGTACTGAT GGGTACCCTG
GCATGGACCG GTAATTTCCG CTTTACATTC GAAGTAGATA ATGAGCACAA CCTGCGCGTG
ATCTCAGGTA TCAACCCATT CGCTTCTGAG TATACCCTGG ATCCGGGCAA GGTATTTACC
ACGCCTTCTT TCATCTTTAC GCTGAGCAAT CAGGGTACTG GTAAAGGTAG CCGCGACCTG
CAGCGCTGGG CGCGTAATTA CCGTTTGAAA GATGGTAACG GCGATCGTAT GACCCTGCTG
AATAACTGGG AGTCAACCGG TTTTGACTTT AATGAAGAGA AACTGAAAAG CCTGATCGAA
GAAACCAAAT ACCTGGGAGC GGACATGTTC CTGCTGGACG ATGGATGGTT TGCCAATAAA
TATCCCCGTC ATAGCGATAC ACAGGGGCTG GGTGACTGGG CGCCTACTGC CAATAAACTG
CCAAACGGAA TACCTGCCCT GGTAAAAGCA GCCAAAGCAA CCGGTGTGAA ATTCGGTATC
TGGATCGAGC CTGAGATGGT GAGTGCGAAG AGCGAACTCT TTGAGAAACA TCCTGACTGG
GTGATCATGC TGCCTAACCG TGAGCGTTAC TATTTCCGTA ATCAGCTGGT ACTGGACCTG
AGCAATCCGG CAGTACAGGA GCACGTATTC AACGTCGTAG ATCACCTGAT GACAGAGAAT
CCTGATCTGG CTTATATGAA ATGGGATTGT AACAGTCCGA TCACCAATAT CTATTCTCCT
TATCTGAAGG AAAAACAAGG TAACCTTTAC ATAGAGTATG TACGCGGTTT ATACAAAGTA
CTGGACCGTA TCAGAGGTAA ATATCCCACT CTGCCGATGA TGCTCTGTTC CGGTGGTGGA
GGCCGAACAG ACTATGAAGG ACTGCGTTAT TTCACTGAAT TCTGGCCAAG CGATAATACC
GATCCGGTAG AACGCTTATA TATTCAGTGG GGTTATTCGC AGTTCTTCCC GGCAAAATCC
ATGGCAGCGC ACGTCACCAG CTGGAACCAT GATGCGAGCA TCAAATTCCG TGTAGATGTT
GCCATGCAGT GTAAACTGGG CTTCGATATC AATATAAAGG AGTTGCGTGC TGAAGAACAG
ACGTTCTGTA AAGAAGCGGT GGCAAACTAC GACAGACTGA AAAACATCAA CTACGATGGC
GACCAGTACA GACTGGTATC TCCTTACGAT GGTAACCACT CGGCTGTCAT GTATGTGAGC
CAGTCGAAGA AACAGGCACT GGTATATGCA TATGATATCT TCCCCCGTTA CTCCGAGATC
CTGCAGCCGG TACAATGCCA GGGACTGAAT CCTGCCGCGA AATACCGTGT AAAGGAAATC
AACCTCATGT CGGGTAATAA CCCAGCAGAT GCATTCAACG GAAAGGTATA TTCCGGAGAT
TACCTGATGA AAATCGGACT GGATTTATTT ACTTCGACTA AATTGCATAG CCGCATACTG
GAACTGGAAG TTGTAGAATA A
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| Protein sequence | MSRKILSILF FLVVITLSAH AETIHIATKE TELVLQTAQN GRLFQLYLGP RLAVADDYNH
LTANMKGKSD GQAWEAYPVS GTETYFEPAF GIRHNDGNQA TVLKYVSHTT KKVSDDVTET
VITLKDDLYP VQVKLFYRTF AKDNIIESWT EISHNEKKAV SINNYASSML YWKRSQYFLT
EFSGDWAKEV NMTTTPLAFG KKMVDSKLGS RANLHVSPFF TVGLGDTPRE NDGQVLMGTL
AWTGNFRFTF EVDNEHNLRV ISGINPFASE YTLDPGKVFT TPSFIFTLSN QGTGKGSRDL
QRWARNYRLK DGNGDRMTLL NNWESTGFDF NEEKLKSLIE ETKYLGADMF LLDDGWFANK
YPRHSDTQGL GDWAPTANKL PNGIPALVKA AKATGVKFGI WIEPEMVSAK SELFEKHPDW
VIMLPNRERY YFRNQLVLDL SNPAVQEHVF NVVDHLMTEN PDLAYMKWDC NSPITNIYSP
YLKEKQGNLY IEYVRGLYKV LDRIRGKYPT LPMMLCSGGG GRTDYEGLRY FTEFWPSDNT
DPVERLYIQW GYSQFFPAKS MAAHVTSWNH DASIKFRVDV AMQCKLGFDI NIKELRAEEQ
TFCKEAVANY DRLKNINYDG DQYRLVSPYD GNHSAVMYVS QSKKQALVYA YDIFPRYSEI
LQPVQCQGLN PAAKYRVKEI NLMSGNNPAD AFNGKVYSGD YLMKIGLDLF TSTKLHSRIL
ELEVVE
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