Gene Cpin_5607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5607 
Symbol 
ID8361784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7157972 
End bp7159345 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content46% 
IMG OID644967750 
ProductMannosyl-oligosaccharide 1,2-alpha-mannosidase 
Protein accessionYP_003125234 
Protein GI256424581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.314857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT GTATTGTGGC TGCCGCAGCC ATGATCGCCT ACCTACCTAT GAAAGCCCAG 
CAAGCGGAGT TATCGCTAAG CGTCAAACAG GAATTTATCA GATCCTGGGA TGCTTACAAA
CGATACGCCT GGGGCCATGA TGTATTATTG CCGCAAACGA AAACCTACAC GGACTGGTAC
GAACAGCCGA TACGTATTTC GCAGATTGAT GCATATAGCA CCATGAAAGT GATGGGCCTC
CAGAAACAGG CCAGAGACAT TGAGAAGTTT GTAACAGATA GTTGCAACTT TGACATAGAC
GTTTACGTAA AGACCTTTGA TGTCAATAAT CGCGTACTGG GAGGACTCTT ATACATGTAC
TCCTGCACAC ACCAGCCTAA AATACTGGAA CGCGCAAGAG ACTTTGGAGA TCGCCTCTTA
AAAGCTTTCA GATCACCGAC AGGAATCCCC TATTACTGGG TCAATCTGAA AACCGGTAAA
GTGAAAGGCG AAAAGGTCAA TACCGCAGAA GCAGCCGCTT ATACACTTGA AATGGGCATC
CTGAGTTATT ACACAAAGGA CCCGAAATAT TATCAGGCGG CGAGGAAAGC GACAGAAGCC
ATATACGGCA GACGCTCAGC CCTCAACCTT ACCGGCAACA TCATCAACAA TGAAACCGGT
GACTGGCTGG AAACCATCAG TTGTATCGGC GCAGGAGGCA GCGCTTACTA TGAAAGTATG
CTGAAAACAT GGCTCCTGTT TAAAGATGAA GCACTGAAAG AAATGTGGGA GAAAACCATT
ACAGCCGTAC ATCAGTATAA CGCAGAAGAA AGTGACACCG CAATATGGTA CCGCAGAACG
GACATGTATT CAGGGGAAAC AAAGAATACA ACTGCGACAG GTTACGACGC ATTCCTGCCA
GCTCTTTTAT GTATCGATAA TGATGCAGAA CAGGCAGCCA GGGTACACCG GACCTGGAAT
AATCTCTGGA AACAGTATGG GATGATTCCG ATGATCTACG ACTTCCGCCG GCAGCATATC
ACGGCAGCAG CGTACGACCT GAATCCCGAG ATCATCGAGT CAGCCTGGTA CCTGTATGAT
TACACAAAAG ATACCGCCTA TCAGCAGATG GGCAGACAGT ACTACAGCGA CATATTGCAG
TATTGCAGGG CAGGCGCCGC ATTCACTGGC GTAATGGATA TCAGAAGTAA ACAGCAGCAG
AATAAAATGC CGGTCTATTT CTTTGCAACA ACAATGAAAT ACCTGTACCT GCTCTTTACA
CCAGACAGTG GATTGAATAC GCTTGATTAC GTATTCACAG CAGAAGGAAA CCCGTTTAAA
ACGGATGAAT TCAAAGCGGC AGAAACAGCC AGACGTCTGG GCATTAATCA GTAA
 
Protein sequence
MKKCIVAAAA MIAYLPMKAQ QAELSLSVKQ EFIRSWDAYK RYAWGHDVLL PQTKTYTDWY 
EQPIRISQID AYSTMKVMGL QKQARDIEKF VTDSCNFDID VYVKTFDVNN RVLGGLLYMY
SCTHQPKILE RARDFGDRLL KAFRSPTGIP YYWVNLKTGK VKGEKVNTAE AAAYTLEMGI
LSYYTKDPKY YQAARKATEA IYGRRSALNL TGNIINNETG DWLETISCIG AGGSAYYESM
LKTWLLFKDE ALKEMWEKTI TAVHQYNAEE SDTAIWYRRT DMYSGETKNT TATGYDAFLP
ALLCIDNDAE QAARVHRTWN NLWKQYGMIP MIYDFRRQHI TAAAYDLNPE IIESAWYLYD
YTKDTAYQQM GRQYYSDILQ YCRAGAAFTG VMDIRSKQQQ NKMPVYFFAT TMKYLYLLFT
PDSGLNTLDY VFTAEGNPFK TDEFKAAETA RRLGINQ