Gene Cpin_5589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5589 
Symbol 
ID8361766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7139714 
End bp7140487 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content44% 
IMG OID644967733 
ProductPhosphosulfolactate synthase 
Protein accessionYP_003125217 
Protein GI256424564 
COG category[S] Function unknown 
COG ID[COG1809] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.102746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTA ACCTGGACAA AATTCCTGAA CGTACGAAAC AACCTCGTTC ATTTGGTATT 
ACAATGGTGA CTGACAAGGG GCTGAGCCTG CAGGATACAA AAGACTTCCT GTCTGTATCT
TCAGCACACG TAGATATGGT GAAGCTGGCT TTCGGTACGG CTTATGTAAC GCCTAACCTG
GATGAAAAGA TCAAAGTATA TCAATCATAT AATATCCCTG TTTATTTTGG TGGTCTGCTG
TTGGAGGCTT TCATTATCCG TAATCAGTTC GATGATTATA TCGATGTGGT AAAAAAGTAC
GGCATCAATT ACTTTGAAGT ATCTGACGGT TCTCTTTCCA TCCCACATGC AGAGAAATGC
GGGTATATCG AGAAACTGGC AAAATTAGGC ACTGTACTGA GCGAAATCGG TTCAAAAGAT
AAAGACCGAG AGCATATCAC GCCGCCTTAT AAATGGATAG AACTGATCAA AGCGGAGCTT
TCTGCCGGTT CTGAGTATAT CATTGCAGAA GCAAGAGAAA CGGGTACGGT AGGTCTGTAC
CGTGATTCCG GTGAGGTAAG GGAAGGGCTG GTACAGGAAA TCCTGACGCA GGTATCCGGA
GAGAAGATTA TCTGGGAAGC GCCCAGAAAG GACCAGCAGC TGTATTTCCT GGACCTGATG
GGTTGTAATG CCAACCTGGG TAATATCGCT TATAATGAGG TGATTTCACT GGAAGCGATG
CGCGTAGGTT TACGTGGCGA TAGTTTCCAT TTTTACCTGG ACGGAACAAA ATAA
 
Protein sequence
MNFNLDKIPE RTKQPRSFGI TMVTDKGLSL QDTKDFLSVS SAHVDMVKLA FGTAYVTPNL 
DEKIKVYQSY NIPVYFGGLL LEAFIIRNQF DDYIDVVKKY GINYFEVSDG SLSIPHAEKC
GYIEKLAKLG TVLSEIGSKD KDREHITPPY KWIELIKAEL SAGSEYIIAE ARETGTVGLY
RDSGEVREGL VQEILTQVSG EKIIWEAPRK DQQLYFLDLM GCNANLGNIA YNEVISLEAM
RVGLRGDSFH FYLDGTK