Gene Cpin_5588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5588 
Symbol 
ID8361765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7138478 
End bp7139473 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content50% 
IMG OID644967732 
Productaldo/keto reductase 
Protein accessionYP_003125216 
Protein GI256424563 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.142249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTT ATGTTCCTGC AAGTGAACGC TATGATACGA TGATATACAA CCGTTGCGGT 
AAAAGCGGTA TCCGCCTCCC GGCGGTTTCA CTGGGTCTCT GGCATAACTT CGGGTCTATC
GATAACTTTG AAAATGGCCG TGCTATCGTA CGTCGTGCCT TCGATAAAGG GATTACCCAT
TTCGACCTGG CCAACAACTA TGGTCCGGTA CCCGGATCTG CAGAAGAGAA TTTCGGCGCG
ATCTTACAGA AAGACTTTAC AGGCAACCTG CGCGATGAAC TGGTCATCTC TACGAAGGCC
GGTTATCATA TGTGGCCTGG TCCGTACGGA GACTGGGGGT CCCGTAAATA TGTGCTGTCC
AGCCTCGATC AGAGTCTGCG TCGTATGAAA CTCGGCTATG TCGACATCTT CTACTCTCAC
CGTCCCGATC CGGAAACGCC GATAGAAGAA ACCATGGGCG CTCTGGATAC TGCCGTTCGT
CAGGGTAAGG CTTTATATGT CGGTCTGTCC AACTATACTG CAGAACAGAC AAAAGCTGCA
CTGGCCGTAT TACAATCATT AGGCACTCCC TGCCTGATCC ATCAGCCGAA ATACTCTATG
TTTGAAAGAT GGGTAGAAGG TGGTCTGCTC GATGTACTGG AAGCGAATGG CGTAGGTTGT
ATTCCATTCT CTCCCCTGGC ACAGGGTTTA CTGACTGATC GTTACCTGAA AGGTATTCCT
GAAGGGTCAA GGGCCAGCAA GCCAAGCGGA TTCCTGAAAG CGGATCATAT CACCCCAGAG
AAACTGGATA AGATCCAGCG GCTGAATGCC ATCGCACTGC AAAGAGGTCA GACGCTGGCA
CAAATGGCAC TGGCATGGAT ACTGAAAGAC AAACGTGTGA CCACTGTACT GATAGGGGCC
AGCTCTGTAG AACAACTGGA TAATAACCTG GGTGCATTAC ACAAGGTGCA GTTTGACGCA
GCAGAATTAC AGGAAATTGA AAACATCCTG CGATAA
 
Protein sequence
MSAYVPASER YDTMIYNRCG KSGIRLPAVS LGLWHNFGSI DNFENGRAIV RRAFDKGITH 
FDLANNYGPV PGSAEENFGA ILQKDFTGNL RDELVISTKA GYHMWPGPYG DWGSRKYVLS
SLDQSLRRMK LGYVDIFYSH RPDPETPIEE TMGALDTAVR QGKALYVGLS NYTAEQTKAA
LAVLQSLGTP CLIHQPKYSM FERWVEGGLL DVLEANGVGC IPFSPLAQGL LTDRYLKGIP
EGSRASKPSG FLKADHITPE KLDKIQRLNA IALQRGQTLA QMALAWILKD KRVTTVLIGA
SSVEQLDNNL GALHKVQFDA AELQEIENIL R